RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CLINT1Q14677 625 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CDO1Q16878 200 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TATDN3Q17R31 274 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ASPRV1Q53RT3 343 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PRAMEF19Q5SWL8 479 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 LGSNQ5TDP6 509 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 VASNQ6EMK4 673 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PRMT9Q6P2P2 845 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TMEM270Q6UE05 265 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SCIMPQ6UWF3 145 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 C16orf86Q6ZW13 317 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF720Q7Z2F6 126 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KANSL1Q7Z3B3 1105 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 GPAT4Q86UL3 456 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 KIF18BQ86Y91 864 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FUNDC1Q8IVP5 155 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CYP4Z2PQ8N1L4 340 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 C9orf62Q8N4C0 152 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CERS5Q8N5B7 392 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PLPP7Q8NBV4 271 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF540Q8NDQ6 660 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FEZF2Q8TBJ5 459 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 EDARADDQ8WWZ3 215 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TFAP2BQ92481 460 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RBPMSQ93062 196 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 FAM149B1Q96BN6 582 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CNDP2Q96KP4 475 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 C12orf42Q96LP6 360 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MYRFLQ96LU7 910 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SLC9A7Q96T83 725 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ADAT1Q9BUB4 502 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 GTPBP2Q9BX10 602 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF518BQ9C0D4 1074 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RACGAP1Q9H0H5 632 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TASP1Q9H6P5 420 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FAM49BQ9NUQ9 324 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MTMR10Q9NXD2 777 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 BFARQ9NZS9 450 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 DRG1Q9Y295 367 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 PRELID3BQ9Y3B1 194 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MTF2Q9Y483 593 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 RPS10-NUDT3A0A1W2PQS6 291 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PMS2P1A4D2B8 440 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CHURC1-FNTBB4DL54 471 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 C19orf81C9J6K1 198 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 UPK1AO00322 258 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 BTN3A1O00481 513 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SLC30A4O14863 429 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ERN1O75460 977 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 ANGPTL1O95841 491 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 LDLRP01130 860 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 APOC3P02656 99 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MPOP05164 745 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SBK3P0C264 359 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MYL4P12829 197 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CCL5P13501 91 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PFKLP17858 780 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RPL17P18621 184 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 OGNP20774 298 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 PRKCHP24723 683 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 HIBADHP31937 336 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 MTHFRP42898 656 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 POU3F4P49335 361 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NUDT6P53370 316 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MEF2AQ02078 507 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 CRYZQ08257 329 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF543Q08ER8 600 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MAPRE2Q15555 327 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 UGT8Q16880 541 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 EXOC3L2Q2M3D2 409 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 UGT3A2Q3SY77 523 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SEZ6Q53EL9 994 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 IER5Q5VY09 327 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 NADSYN1Q6IA69 706 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PKN3Q6P5Z2 889 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FAM183BPQ6ZVS7 135 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ZNF534Q76KX8 674 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ENOSF1Q7L5Y1 443 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MAMDC2Q7Z304 686 aaPredicted RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 B3GNT8Q7Z7M8 397 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PAQR7Q86WK9 346 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TMEM132CQ8N3T6 1108 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 TRPV3Q8NET8 790 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FBXO30Q8TB52 745 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 GANCQ8TET4 914 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 ASZ1Q8WWH4 475 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 REPS1Q96D71 796 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PEX11GQ96HA9 241 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 MRGPRX2Q96LB1 330 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SIGLEC10Q96LC7 697 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CEP19Q96LK0 163 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 C3orf30Q96M34 536 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CMSS1Q9BQ75 279 aaKnown RBP3.64□□□□□ -1.83
MCF2-210ENST00000536274 WDR18Q9BV38 432 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 SPNS1Q9H2V7 528 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 RHBGQ9H310 441 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 FAM83DQ9H4H8 585 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 PPCSQ9HAB8 311 aa3.64□□□□□ -1.83
MCF2-210ENST00000536274 CD320Q9NPF0 282 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms