RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CGREF1Q99674 301 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GPR22Q99680 433 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 FEM1AQ9BSK4 669 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 BCO2Q9BYV7 579 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 EBF2Q9HAK2 575 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ACTR3BQ9P1U1 418 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CYTH4Q9UIA0 394 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PPIEQ9UNP9 301 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 A0A0G2JLL6 359 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 FAM172BPA6NC97 362 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 METTL21EPA6NDL7 271 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 A8MT66 165 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CCRL2O00421 344 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ARPC2O15144 300 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SEPT4O43236 478 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TLX3O43711 291 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PCDH7O60245 1069 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 LGR5O75473 907 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SMPD1P17405 629 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 IL4RP24394 825 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PRKCHP24723 683 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NDUFS1P28331 727 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PCDH1Q08174 1060 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CAMK1Q14012 370 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SOWAHAQ2M3V2 549 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 DEFB115Q30KQ5 88 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PLA2G4EQ3MJ16 856 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PRRT2Q7Z6L0 340 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NUDT13Q86X67 352 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 OR10G2Q8NGC3 310 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NEK7Q8TDX7 302 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 METTL21AQ8WXB1 218 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SMG7Q92540 1137 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GTPBP3Q969Y2 492 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 MAPKAP1Q9BPZ7 522 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 HTATIP2Q9BUP3 242 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CNPPD1Q9BV87 410 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GPR88Q9GZN0 384 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SLC22A4Q9H015 551 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 POPDC3Q9HBV1 291 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 MOCS1Q9NZB8 636 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 FLRT1Q9NZU1 646 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 AASSQ9UDR5 926 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CPQQ9Y646 472 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CAMTA1Q9Y6Y1 1673 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 A0A1W2PRB8 838 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TTC34A8MYJ7 566 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 FOXO6A8MYZ6 492 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CHP2O43745 196 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 FAM189A1O60320 539 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TBX10O75333 385 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 EPHX1P07099 455 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 LMO2P25791 158 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 UGT1A3P35503 534 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ARCN1P48444 511 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PRMT2P55345 433 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 MTPNP58546 118 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NFKB2Q00653 900 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 HSPB3Q12988 150 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SCARB2Q14108 478 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TIGD6Q17RP2 521 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CRTC2Q53ET0 693 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CARD16Q5EG05 197 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 DCAF12L1Q5VU92 463 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 EPGNQ6UW88 154 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 RASSF6Q6ZTQ3 369 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CADM2Q8N3J6 435 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 KLHL36Q8N4N3 616 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 RDH12Q96NR8 316 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ERMAPQ96PL5 475 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PSKH2Q96QS6 385 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 EBPLQ9BY08 206 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 RNF38Q9H0F5 515 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SLC32A1Q9H598 525 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 VPS29Q9UBQ0 182 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 RBMX2Q9Y388 322 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 LRRC42Q9Y546 428 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TEX264Q9Y6I9 313 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 MATN4O95460 622 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MT-ND1P03886 318 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SLURP2P0DP57 97 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF280AP59817 542 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CYP4F8P98187 520 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF460Q14592 562 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 FAM189A2Q15884 450 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ANKDD1AQ495B1 522 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PLPP4Q5VZY2 271 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 NIPAL1Q6NVV3 410 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 BORAQ6PGQ7 559 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ANKRD46Q86W74 232 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SMG8Q8ND04 991 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SLAIN1Q8ND83 568 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 FBXO22Q8NEZ5 403 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TAMM41Q96BW9 452 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PIWIL1Q96J94 861 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ARL5BQ96KC2 179 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CNDP2Q96KP4 475 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MIR1-1HGQ9H1L0 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms