RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 C2orf81A6NN90 581 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 TIAF1O95411 115 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 SYF2O95926 243 aaKnown RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 NELFEP18615 380 aaKnown RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 GCAP28676 217 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 MSH2P43246 934 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 ARCN1P48444 511 aaKnown RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 TMPRSS15P98073 1019 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 GPS2Q13227 327 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 TUBB3Q13509 450 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 PTPRCAPQ14761 206 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 CRB2Q5IJ48 1285 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 CACHD1Q5VU97 1274 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 IGFL3Q6UXB1 125 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 CHST15Q7LFX5 561 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 GLT6D1Q7Z4J2 308 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 CTAGE3PQ8IX95 158 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 GOLGA6L1Q8N7Z2 621 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 STYXQ8WUJ0 223 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 TM9SF4Q92544 642 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 HDAC10Q969S8 669 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 CERS2Q96G23 380 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZDHHC12Q96GR4 267 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 SGSM3Q96HU1 749 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 SRPK1Q96SB4 655 aaKnown RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 GPR63Q9BZJ6 419 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 TRABDQ9H4I3 376 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 AKIRIN1Q9H9L7 192 aaPredicted RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 CHST11Q9NPF2 352 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 PPANQ9NQ55 473 aaKnown RBP11□□□□□ -0.65
TRAPPC4-213ENST00000533149 FAM53CQ9NYF3 392 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 IL1RAPL1Q9NZN1 696 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 OGFRQ9NZT2 677 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC24A2Q9UI40 661 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 RIMKLBQ9ULI2 386 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 SNX7Q9UNH6 387 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF711Q9Y462 761 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 HIVEP1P15822 2718 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 RGS16O15492 202 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 UGT1A9O60656 530 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 SNX2O60749 519 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 DIAPH2O60879 1101 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 VAPBO95292 243 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 ASMTLO95671 621 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 TYRP1P17643 537 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 PAMP19021 973 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 PSMA3P25788 255 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 GLRBP48167 497 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 ACVR1Q04771 509 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 HSP90B2PQ58FF3 399 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 HSP90AA5PQ58FG0 334 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 TEDDM1Q5T9Z0 273 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 PDPK2PQ6A1A2 396 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 KIAA0930Q6ICG6 404 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNF449Q6P9G9 518 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 TMEM26Q6ZUK4 368 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 NLRP8Q86W28 1048 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 KCNMB4Q86W47 210 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 LRRC6Q86X45 466 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 TDRPQ86YL5 185 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 OR4K2Q8NGD2 314 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 OR13C4Q8NGS5 318 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 OR13J1Q8NGT2 312 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 DCAKDQ8WVC6 231 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC44A1Q8WWI5 657 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 MR1Q95460 341 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 AP2M1Q96CW1 435 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 SCRN2Q96FV2 425 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 DNAJC1Q96KC8 554 aaKnown RBP10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 PAFAH2Q99487 392 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 DHRS4Q9BTZ2 278 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 RMI1Q9H9A7 625 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 PPCSQ9HAB8 311 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 UGT1A7Q9HAW7 530 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 UGT1A10Q9HAW8 530 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 UGT1A8Q9HAW9 530 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 WASH6PQ9NQA3 447 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 IARS2Q9NSE4 1012 aaKnown RBP10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 FETUBQ9UGM5 382 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 PCNX1Q96RV3 2341 aa10.99□□□□□ -0.65
TRAPPC4-213ENST00000533149 POLEQ07864 2286 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 GOLGA8KD6RF30 607 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 H3BQF6 201 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 GOLGA8TH3BQL2 631 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CCL22O00626 93 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 STX7O15400 261 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 DNAJC6O75061 913 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CDH16O75309 829 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 FAM155BO75949 473 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 IPO13O94829 963 aaKnown RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CLDN7O95471 211 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 SOD1P00441 154 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC4A1P02730 911 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 KLK3P07288 261 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 RAB40ALP0C0E4 278 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 EDN3P14138 238 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 COX6B1P14854 86 aa10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 XRCC1P18887 633 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC4-213ENST00000533149 CAPN3P20807 821 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms