RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	OR6C2	Q9NZP2	312 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	ABI3	Q9P2A4	366 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	GUCA1B	Q9UMX6	200 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	ICK	Q9UPZ9	632 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	SLU7	O95391	586 aa	Known RBP	11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	HP	P00738	406 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	ATP1B2	P14415	290 aa	Predicted RBP	11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	NFKB1	P19838	968 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	CHRNA4	P43681	627 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	NR2C2	P49116	596 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	TNFSF10	P50591	281 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	CASP6	P55212	293 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	TAF1A	Q15573	450 aa	Predicted RBP	11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	ZIC1	Q15915	447 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	RBBP7	Q16576	425 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	NKG7	Q16617	165 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	ZNF658B	Q4V348	819 aa	Predicted RBP	11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	LINC00696	Q6ZRV3	163 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	SLC35F6	Q8N357	371 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	SLC25A41	Q8N5S1	370 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	OR11G2	Q8NGC1	345 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	OR1N1	Q8NGS0	311 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	DNAJB8	Q8NHS0	232 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	TFG	Q92734	400 aa	Predicted RBP	11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	OR2A14	Q96R47	310 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	FCRL5	Q96RD9	977 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	VAT1	Q99536	393 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	COPS8	Q99627	209 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	ENAM	Q9NRM1	1142 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	IL1RAPL1	Q9NZN1	696 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	CTTNBP2NL	Q9P2B4	639 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	POLG2	Q9UHN1	485 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	CRLS1	Q9UJA2	301 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	JRKL	Q9Y4A0	524 aa		11.94	□□□□□ -0.5
CAPN1-223	ENST00000533079	DIDO1	Q9BTC0	2240 aa	Known RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	CCDC78	A2IDD5	438 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	C3orf70	A6NLC5	250 aa	Predicted RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	DSCR3	O14972	297 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	HCRTR1	O43613	425 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	BUD23	O43709	281 aa	Known RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	ALOX12B	O75342	701 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	UNC5C	O95185	931 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	SNRPB2	P08579	225 aa	Known RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	CHRM5	P08912	532 aa	Predicted RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	H2AFZ	P0C0S5	128 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	CD1E	P15812	388 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	CD68	P34810	354 aa	Predicted RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	CARS	P49589	748 aa	Known RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	SMS	P52788	366 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	FOXL2	P58012	376 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	KIR2DS3	Q14952	304 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	H2AFV	Q71UI9	128 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	TRIM73	Q86UV7	250 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	ZNF295-AS1	Q8N0V1	137 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	DNAJC22	Q8N4W6	341 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	FLVCR1-AS1	Q8TAF5	88 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	TFB1M	Q8WVM0	346 aa	Known RBP	11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	TAAR6	Q96RI8	345 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	XKR8	Q9H6D3	395 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	EURL	Q9NYK6	297 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	SEC14L3	Q9UDX4	400 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	MRFAP1	Q9Y605	127 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	ARL5A	Q9Y689	179 aa		11.93	□□□□□ -0.5
CAPN1-223	ENST00000533079	IGLV3-16	A0A075B6K0	115 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	UQCRHL	A0A096LP55	91 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	C5orf60	A6NFR6	353 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	QSOX1	O00391	747 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	URI1	O94763	535 aa	Predicted RBP	11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	UQCRH	P07919	91 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	TMEM253	P0C7T8	217 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	MYBL2	P10244	700 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	ACPP	P15309	386 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	ITGAL	P20701	1170 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	ALAS2	P22557	587 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	SOX11	P35716	441 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	TMPRSS15	P98073	1019 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079		Q0VFX4	171 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	WASHC5	Q12768	1159 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	TCTE1	Q5JU00	501 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	NPNT	Q6UXI9	565 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	UNC5A	Q6ZN44	842 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	TTLL10	Q6ZVT0	673 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	COX15	Q7KZN9	410 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	NLRP9	Q7RTR0	991 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	CPNE8	Q86YQ8	564 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	KBTBD2	Q8IY47	623 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	TBC1D21	Q8IYX1	336 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	CATSPER1	Q8NEC5	780 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	IPMK	Q8NFU5	416 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	OR4K2	Q8NGD2	314 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	CCDC110	Q8TBZ0	833 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	CHTF18	Q8WVB6	975 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	HAS2	Q92819	552 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	ALS2CR12	Q96Q35	445 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	SPOCK3	Q9BQ16	436 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	RNF32	Q9H0A6	362 aa		11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.92	□□□□□ -0.5
CAPN1-223	ENST00000533079	FKBPL	Q9UIM3	349 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms