RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 MAPK9P45984 424 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CCR10P46092 362 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 TTPAP49638 278 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CSE1LP55060 971 aaKnown RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 MC2RQ01718 297 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 HHEXQ03014 270 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CDC20Q12834 499 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 AARS2Q5JTZ9 985 aaKnown RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CTSL3PQ5NE16 218 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 RBM20Q5T481 1227 aaKnown RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 ATP1A1-AS1Q5TC04 95 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 LYPLAL1Q5VWZ2 237 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 ZNF549Q6P9A3 640 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 WDR74Q6RFH5 385 aaPredicted RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 C6orf89Q6UWU4 347 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CERS6Q6ZMG9 384 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 ARHGAP22Q7Z5H3 698 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 STRA8Q7Z7C7 330 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 LRRTM4Q86VH4 590 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CNTN4Q8IWV2 1026 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 NLGN4XQ8N0W4 816 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 LILRA3Q8N6C8 439 aaPredicted RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 C2CD4AQ8NCU7 369 aaPredicted RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 NLGN4YQ8NFZ3 816 aaPredicted RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 CALML6Q8TD86 181 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 NCSTNQ92542 709 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 SLC45A3Q96JT2 553 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 NDNQ99608 321 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 TTC1Q99614 292 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 ZCCHC2Q9C0B9 1178 aaKnown RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 P2RY12Q9H244 342 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 GPN2Q9H9Y4 310 aaPredicted RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 SARS2Q9NP81 518 aaKnown RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 ZNF71Q9NQZ8 489 aaPredicted RBP9.15□□□□□ -0.94
VPS26B-207ENST00000532160 KLHL3Q9UH77 587 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 LGALS13Q9UHV8 139 aa9.15□□□□□ -0.94
VPS26B-207ENST00000532160 UTP20O75691 2785 aaKnown RBP9.15□□□□□ -0.95
VPS26B-207ENST00000532160 POC1B-GALNT4F8VUJ3 575 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 PRMT5O14744 637 aaPredicted RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 CHUKO15111 745 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 SNX2O60749 519 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 SPAG6O75602 509 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 POP7O75817 140 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 STK17BO94768 372 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 GSTA2P09210 222 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 STX2P32856 288 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 PHBP35232 272 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 LEPRP48357 1165 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 GFERP55789 205 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 FRG1Q14331 258 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 NFE2L1Q14494 772 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 SEPT7Q16181 437 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 IGFBP7Q16270 282 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 INSCQ1MX18 579 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 PTRHD1Q6GMV3 140 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 IYDQ6PHW0 289 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 FAM83HQ6ZRV2 1179 aaPredicted RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 C11orf96Q7Z7L8 435 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 TDRPQ86YL5 185 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 ACVR1CQ8NER5 493 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 STARD8Q92502 1023 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 CDKL2Q92772 493 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 BIRC8Q96P09 236 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 CATSPER2Q96P56 530 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 TEFMQ96QE5 360 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 TBC1D10AQ9BXI6 508 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 OSGEPL1Q9H4B0 414 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 KLC4Q9NSK0 619 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 GALPQ9UBC7 116 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 TSR3Q9UJK0 312 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 TUBD1Q9UJT1 453 aa9.14□□□□□ -0.95
VPS26B-207ENST00000532160 MRPS18BQ9Y676 258 aaKnown RBP9.14□□□□□ -0.95
VPS26B-207ENST00000532160 CFAP73A6NFT4 308 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 PFDN6O15212 129 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 KMOO15229 486 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 CAPN5O15484 640 aaPredicted RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 DLGAP3O95886 979 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 SHBGP04278 402 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 OR56A5P0C7T3 313 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 F3P13726 295 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 PKMP14618 531 aaKnown RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 CHRM3P20309 590 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 SAT1P21673 171 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 F8A1P23610 371 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 RPL10P27635 214 aaKnown RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 MAP4P27816 1152 aaKnown RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 PPARGP37231 505 aaPredicted RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 CASRP41180 1078 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 CD151P48509 253 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 PRLHRP49683 370 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 ACTN3Q08043 901 aaPredicted RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 BMPR2Q13873 1038 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 BOP1Q14137 746 aaKnown RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 DEFB109BQ30KR1 87 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 BCL7AQ4VC05 210 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 RNF187Q5TA31 235 aaPredicted RBP9.13□□□□□ -0.95
VPS26B-207ENST00000532160 CEACAM20Q6UY09 585 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 PACS1Q6VY07 963 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 SLC9B2Q86UD5 537 aa9.13□□□□□ -0.95
VPS26B-207ENST00000532160 LMNTD2Q8IXW0 634 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms