RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SAT1P21673 171 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 PEBP1P30086 187 aaKnown RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 HSD17B3P37058 310 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 HSD17B2P37059 387 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 MSH2P43246 934 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 KPNA2P52292 529 aaKnown RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 SLC12A2P55011 1212 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 BMPR2Q13873 1038 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 KIR2DS3Q14952 304 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 C16orf72Q14CZ0 275 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 RTP5Q14D33 572 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 PHKG1Q16816 387 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 ANKS6Q68DC2 871 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 FBXO38Q6PIJ6 1188 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 TIFABQ6ZNK6 161 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 UBE2R2Q712K3 238 aaPredicted RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 CMC1Q7Z7K0 106 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 MARCH9Q86YJ5 346 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 TDRPQ86YL5 185 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 LRRC56Q8IYG6 542 aaPredicted RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 PRR11Q96HE9 360 aaPredicted RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 SLC41A2Q96JW4 573 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 OR2A14Q96R47 310 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 PKP4Q99569 1192 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 STRADBQ9C0K7 418 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 SYNDIG1Q9H7V2 258 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 SNX15Q9NRS6 342 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 SPHK1Q9NYA1 384 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 PLAGL1Q9UM63 463 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 PCDHGA8Q9Y5G5 932 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 FREM2Q5SZK8 3169 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 USP24Q9UPU5 2620 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 FRYQ5TBA9 3013 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 A0A1W2PPV9 198 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 PIPSLA2A3N6 862 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 KRT87PA6NCN2 255 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 POC1B-GALNT4F8VUJ3 575 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 KRT38O76015 456 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 DXOO77932 396 aaKnown RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 FKBP9O95302 570 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 SLC16A8O95907 504 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 SHBGP04278 402 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CCDC166P0CW27 439 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CD1DP15813 335 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CYP2A7P20853 494 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 MLLT3P42568 568 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 LSSP48449 732 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 SERPINB8P50452 374 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 AP1S2P56377 157 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CDKL1Q00532 357 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 PRKAA1Q13131 559 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 HSP90B2PQ58FF3 399 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 BEND6Q5SZJ8 279 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 SPESP1Q6UW49 350 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 UNQ6494/PRO21346Q6UXR6 183 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 TAOK1Q7L7X3 1001 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 KMT5CQ86Y97 462 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CENPLQ8N0S6 344 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 BMPERQ8N8U9 685 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 WDR36Q8NI36 951 aaKnown RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 MCOLN3Q8TDD5 553 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 MZB1Q8WU39 189 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 ZNF480Q8WV37 535 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 UBLCP1Q8WVY7 318 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CCDC138Q96M89 665 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 TGM7Q96PF1 710 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 B3GNT4Q9C0J1 378 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 CHRNA10Q9GZZ6 450 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 C1GALT1Q9NS00 363 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 SIDT1Q9NXL6 827 aaKnown RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 ACTR10Q9NZ32 417 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 TSR3Q9UJK0 312 aaKnown RBP13.99□□□□□ -0.17
CPSF1-206ENST00000531480 KLK4Q9Y5K2 254 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
CPSF1-206ENST00000531480 KMT2BQ9UMN6 2715 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 A0A087X1B8 175 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 IGHV5-51A0A0C4DH38 117 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 E7ENX8 843 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 CDC7O00311 574 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 KIF1CO43896 1103 aaKnown RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 CAPNS1P04632 268 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 C2P06681 752 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 SNRPAP09012 282 aaKnown RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 MSL3P1P0C860 447 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 UGT2B7P16662 529 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 NELFEP18615 380 aaKnown RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 MPSTP25325 297 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 MAP4P27816 1152 aaKnown RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 IMPA1P29218 277 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 ATP6V0D1P61421 351 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 TAP2Q03519 686 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 DLG1Q12959 904 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 SLC5A12Q1EHB4 618 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 ZXDCQ2QGD7 858 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 CDKL4Q5MAI5 379 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 PHF19Q5T6S3 580 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 IRGCQ6NXR0 463 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 RAB11FIP2Q7L804 512 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 ADAMTSL2Q86TH1 951 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms