RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CHST4Q8NCG5 386 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 KLK6Q92876 244 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SLC29A3Q9BZD2 475 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 FAM159BA6NKW6 160 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 DUXAA6NLW8 204 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TMEM150CB9EJG8 249 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 COQ9O75208 318 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 RB1P06400 928 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF3P17036 446 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF30P17039 623 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PLA2G16P53816 162 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TAS2R50P59544 299 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 DSTNP60981 165 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 FSTL1Q12841 308 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PDGFRLQ15198 375 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TOR1AIP1Q5JTV8 583 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 RASSF6Q6ZTQ3 369 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CCDC80Q76M96 950 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 KLHL36Q8N4N3 616 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 OR10H4Q8NGA5 316 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SLCO2A1Q92959 643 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PMEPA1Q969W9 287 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 EFHD2Q96C19 240 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 C11orf24Q96F05 449 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 B3GALT6Q96L58 329 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TMED5Q9Y3A6 229 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PRKCGP05129 697 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CASRP41180 1078 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CTSOP43234 321 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SLC10A7Q0GE19 358 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 E2F2Q14209 437 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 UBXN2BQ14CS0 331 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 DUOXA1Q1HG43 343 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 MYLK3Q32MK0 819 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 INAVAQ3KP66 663 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ADGRF1Q5T601 910 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 DCAF12L1Q5VU92 463 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PIGWQ7Z7B1 504 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 LRRTM4Q86VH4 590 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CAMK1GQ96NX5 476 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SLC32A1Q9H598 525 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PFDN2Q9UHV9 154 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 NR2E1Q9Y466 385 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ELOA3DA6NLF2 546 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 B4DGG1 531 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PRPS1L1P21108 318 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 FECHP22830 423 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 IL1R2P27930 398 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 RORCP51449 518 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SLC25A11Q02978 314 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 GANABQ14697 944 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 RAB30Q15771 203 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SWI5Q1ZZU3 235 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ELOA3BQ3SY89 546 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PDE12Q6L8Q7 609 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SMARCD3Q6STE5 483 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 GOLGA7Q7Z5G4 137 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 THOC6Q86W42 341 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 DBF4BQ8NFT6 615 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ELOA3Q8NG57 546 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CYB5D2Q8WUJ1 264 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ART5Q96L15 291 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 LRRC3Q9BY71 257 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CCSER2Q9H7U1 834 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TRIM39Q9HCM9 518 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TMEM248Q9NWD8 314 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ZIM2Q9NZV7 527 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 RGS17Q9UGC6 210 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 FZD4Q9ULV1 537 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 RPL36Q9Y3U8 105 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 FKBP7Q9Y680 259 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 KCPQ6ZWJ8 1503 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TTC24A2A3L6 582 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 NDUFS4O43181 175 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ZNF208O43345 1280 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TRIM3O75382 744 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ADH1BP00325 375 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 POU2F1P14859 743 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PEX2P28328 305 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 AQP4P55087 323 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CASP9P55211 416 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 FCHO2Q0JRZ9 810 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 PAFAH1B3Q15102 231 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SMU1Q2TAY7 513 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ZDHHC24Q6UX98 284 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TMEM110Q86TL2 294 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TMEM145Q8NBT3 493 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 HTRA1Q92743 480 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CYP2S1Q96SQ9 504 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 GSDMCQ9BYG8 508 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 TRIM2Q9C040 744 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 COQ10BQ9H8M1 238 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 CARS2Q9HA77 564 aaKnown RBP8.3□□□□□ -1.08
CTNND1-227ENST00000530748 GDAP2Q9NXN4 497 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 SPATA7Q9P0W8 599 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 VPS29Q9UBQ0 182 aa8.3□□□□□ -1.08
CTNND1-227ENST00000530748 ERVK-11Q9UQG0 969 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms