RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ZNF658BQ4V348 819 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 TEX44Q53QW1 395 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 ZC3H12BQ5HYM0 836 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 ABHD17BQ5VST6 288 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 HIBCHQ6NVY1 386 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 TAOK1Q7L7X3 1001 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 NLRP9Q7RTR0 991 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 DOLPP1Q86YN1 238 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 SIRT6Q8N6T7 355 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 STT3BQ8TCJ2 826 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 AGAP11Q8TF27 550 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 MIEF2Q96C03 454 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 SDCCAG3Q96C92 435 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 COG4Q9H9E3 785 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 VPS37BQ9H9H4 285 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 LUC7LQ9NQ29 371 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 SPHK1Q9NYA1 384 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 FAM153AQ9UHL3 310 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 C3orf18Q9UK00 162 aa11.11□□□□□ -0.63
AMBRA1-207ENST00000529553 NUP210LQ5VU65 1888 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 A0A0A6YYK5 440 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 MYO1FO00160 1098 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 DDX3XO00571 662 aaKnown RBP eCLIP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 STX7O15400 261 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 TTI1O43156 1089 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 KDM1AO60341 852 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 TSPAN12O95859 305 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 HOXD4P09016 255 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ATP1B2P14415 290 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 PDHA2P29803 388 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 OR1D4P47884 311 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ALDH6A1Q02252 535 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 SRSF11Q05519 484 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 PDK1Q15118 436 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ZNF766Q5HY98 468 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 SIRPB2Q5JXA9 342 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 PRMT9Q6P2P2 845 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ZNF571Q7Z3V5 609 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 TBC1D21Q8IYX1 336 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 TTC29Q8NA56 475 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 LILRB4Q8NHJ6 448 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ASB5Q8WWX0 329 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ULK4Q96C45 1275 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 TEKT5Q96M29 485 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ZNF285Q96NJ3 590 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 MDFIQ99750 246 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 HGH1Q9BTY7 390 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 HAUS4Q9H6D7 363 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ASB8Q9H765 288 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ZNF304Q9HCX3 659 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 RIC8BQ9NVN3 520 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 AIPL1Q9NZN9 384 aa11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 ZNF282Q9UDV7 671 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 LIMA1Q9UHB6 759 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-207ENST00000529553 IGLV3-12A0A075B6K2 115 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 IGHV1-45A0A0A0MS14 117 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 ASPDHA6ND91 283 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 CFAP99D6REC4 459 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 PRRG2O14669 202 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 ASNA1O43681 348 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 SRPX2O60687 465 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 SRP72O76094 671 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 F10P00742 488 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 UQCRHP07919 91 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 ABOP16442 354 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 PRKCIP41743 596 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 SSR1P43307 286 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 WNT3AP56704 352 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 UBE2HP62256 183 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 OLIG2Q13516 323 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 SKOR2Q2VWA4 1001 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 TFDP3Q5H9I0 405 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 GHDCQ8N2G8 530 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 BLOC1S5Q8TDH9 187 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 SLC22A18Q96BI1 424 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 C8orf44Q96CB5 159 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 RNF157Q96PX1 679 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 ALPK1Q96QP1 1244 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 COPS8Q99627 209 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 C19orf43Q9BQ61 176 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 MESP1Q9BRJ9 268 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 REPIN1Q9BWE0 567 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 CEP41Q9BYV8 373 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 ANAPC7Q9UJX3 599 aa11.09□□□□□ -0.63
AMBRA1-207ENST00000529553 LOC102723996A0A087X1L8 192 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 C2orf81A6NN90 581 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 ISM1B1AKI9 464 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 ZNF487B1APH4 448 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 FAM227AF5H4B4 570 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 PPP1R12AO14974 1030 aaPredicted RBP11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 BUD23O43709 281 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 ZWINTO95229 277 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 MSX1P28360 303 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 EMP2P54851 167 aa11.08□□□□□ -0.64
AMBRA1-207ENST00000529553 PMP22Q01453 160 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms