RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ZYG11AQ6WRX3 759 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 TMEM26Q6ZUK4 368 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 CCDC63Q8NA47 563 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PDPRQ8NCN5 879 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 NETO1Q8TDF5 533 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ZNF480Q8WV37 535 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 RHBDF1Q96CC6 855 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 FBXL8Q96CD0 374 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 EGFL8Q99944 293 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 DLL3Q9NYJ7 618 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 STOX2Q9P2F5 926 aaPredicted RBP11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 LRIT1Q9P2V4 623 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PTBP2Q9UKA9 531 aaKnown RBP11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PADI4Q9UM07 663 aa11.79□□□□□ -0.52
TRAF3IP2-211ENST00000528599 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 A8MT66 165 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 FLRT2O43155 660 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 FOXD2O60548 495 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SMIM24O75264 130 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ANXA5P08758 320 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 DHRS4L1P0CG22 281 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 MYL2P10916 166 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ERGP11308 486 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 GFAPP14136 432 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ATP5F1P24539 256 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PKLRP30613 574 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 AGTR2P50052 363 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 FASTKQ14296 549 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PCLAFQ15004 111 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 NR0B2Q15466 257 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PFKFB4Q16877 469 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 CDKL4Q5MAI5 379 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 AGTRAPQ6RW13 159 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 RBM12BQ8IXT5 1001 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 FBXO39Q8N4B4 442 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 C2orf73Q8N5S3 287 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PTGR2Q8N8N7 351 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 LINC01555Q8NAE3 123 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 AVL9Q8NBF6 648 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PPFIBP2Q8ND30 876 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 OR4E2Q8NGC2 313 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 RDH11Q8TC12 318 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 MGARPQ8TDB4 240 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 RHBDD1Q8TEB9 315 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SETD7Q8WTS6 366 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 LCN9Q8WX39 176 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ESAMQ96AP7 390 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PHF21BQ96EK2 531 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 TMEM79Q9BSE2 394 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 MECRQ9BV79 373 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 TBC1D10AQ9BXI6 508 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ATG10Q9H0Y0 220 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 EPN3Q9H201 632 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 UCK1Q9HA47 277 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 COPG2Q9UBF2 871 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ASB1Q9Y576 335 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PABPN1LA6NDY0 278 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 LRRC14BA6NHZ5 514 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 RHPN2P1A8MT19 583 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 E7ENX8 843 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SLC30A4O14863 429 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 NUDT21O43809 227 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SH3BP5O60239 455 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 S100BP04271 92 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 GLB1P16278 677 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 TAC1P20366 129 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 KCNA4P22459 653 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ALDH3A1P30838 453 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SERPINB4P48594 390 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 RAB28P51157 221 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PNLIPRP1P54315 467 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 TAP2Q03519 686 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 BIRC2Q13490 618 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SETDB1Q15047 1291 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 PLCL1Q15111 1095 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 CYP2A13Q16696 494 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 INAVAQ3KP66 663 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SULT1C3Q6IMI6 304 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 GUSBP11Q6P575 273 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 ZNF438Q7Z4V0 828 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 C10orf107Q8IVU9 208 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 LRRC56Q8IYG6 542 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SH3KBP1Q96B97 665 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 STN1Q9H668 368 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 NKIRAS1Q9NYS0 192 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 NCKIPSDQ9NZQ3 722 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 LNPEPQ9UIQ6 1025 aa11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 CDV3Q9UKY7 258 aaKnown RBP11.78□□□□□ -0.52
TRAF3IP2-211ENST00000528599 GOLGA4Q13439 2230 aaKnown RBP11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CPED1A4D0V7 1026 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 BTN3A3O00478 584 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SIX3O95343 332 aaPredicted RBP11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 BPGMP07738 259 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CKMT1AP12532 417 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SHMT2P34897 504 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GGT5P36269 586 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GDF5P43026 501 aa11.77□□□□□ -0.53
TRAF3IP2-211ENST00000528599 HSPA7P48741 367 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms