RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 GSTM1P09488 218 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ARSDP51689 593 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 OTUD1Q5VV17 481 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 SHQ1Q6PI26 577 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 CCDC190Q86UF4 302 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 OR56A4Q8NGH8 313 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 SETD6Q8TBK2 473 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 MTERF3Q96E29 417 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 PYURFQ96I23 114 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ZNF599Q96NL3 588 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 SDHCQ99643 169 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 DPY30Q9C005 99 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 TAS2R16Q9NYV7 291 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ZMYM5Q9UJ78 669 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ABCG2Q9UNQ0 655 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 NPEPPSL1A6NEC2 478 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 UGT2B17O75795 530 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 CTRB1P17538 263 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 RPS3P23396 243 aaKnown RBP eCLIP12.22□□□□□ -0.45
TSKU-203ENST00000527881 ICAM3P32942 547 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 PIK3CGP48736 1102 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 CCT3P49368 545 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 PRIM2P49643 509 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 RAB25P57735 213 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 GRIK2Q13002 908 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 PYDC2Q56P42 97 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 CTRB2Q6GPI1 263 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ZNF605Q86T29 641 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 NLRP8Q86W28 1048 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 OR8J3Q8NGG0 315 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 BLOC1S5Q8TDH9 187 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ASB15Q8WXK1 588 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ISG20Q96AZ6 181 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 TBATAQ96M53 351 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 FCRL5Q96RD9 977 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 BRINP2Q9C0B6 783 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 REEP1Q9H902 201 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 IMPAD1Q9NX62 359 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 LEUTXA8MZ59 168 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 CDC7O00311 574 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 ECI2O75521 394 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 MTRF1O75570 445 aaKnown RBP12.21□□□□□ -0.45
TSKU-203ENST00000527881 HLA-DQB2P05538 268 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 MTHFD2P13995 350 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 PIK3CBP42338 1070 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 ZFP36L2P47974 494 aaKnown RBP12.21□□□□□ -0.45
TSKU-203ENST00000527881 RGS6P49758 472 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 NFKB2Q00653 900 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 ALDH6A1Q02252 535 aaKnown RBP12.21□□□□□ -0.45
TSKU-203ENST00000527881 PTPRCAPQ14761 206 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 LAX1Q8IWV1 398 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 PHC2Q8IXK0 858 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 DCAF13Q9NV06 445 aaKnown RBP12.21□□□□□ -0.45
TSKU-203ENST00000527881 MIOSQ9NXC5 875 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 ZNF451Q9Y4E5 1061 aa12.21□□□□□ -0.45
TSKU-203ENST00000527881 COL14A1Q05707 1796 aaKnown RBP12.21□□□□□ -0.45
TSKU-203ENST00000527881 AHDC1Q5TGY3 1603 aaPredicted RBP12.21□□□□□ -0.45
TSKU-203ENST00000527881 PER2O15055 1255 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 GLP2RO95838 553 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 S1PR4O95977 384 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 PTHP01270 115 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 TSPAN19P0C672 248 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 PIRTP0C851 137 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 GLULP15104 373 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 INPP1P49441 399 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 CRISP3P54108 245 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 TIMM50Q3ZCQ8 353 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 INO80DQ53TQ3 878 aaPredicted RBP12.21□□□□□ -0.46
TSKU-203ENST00000527881 FAM122CQ6P4D5 195 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 TLK2Q86UE8 772 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 ANKRD46Q86W74 232 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 PLCZ1Q86YW0 608 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 TIGD4Q8IY51 512 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 DPP10Q8N608 796 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 GALNT11Q8NCW6 608 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 ZMIZ2Q8NF64 920 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 TTC9Q92623 222 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 CXCL16Q9H2A7 254 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 RNF121Q9H920 327 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 ABCB9Q9NP78 766 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 NT5MQ9NPB1 228 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 CLCA3PQ9Y6N3 262 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 HSPE1-MOB4S4R3N1 261 aa12.21□□□□□ -0.46
TSKU-203ENST00000527881 YJEFN3A6XGL0 299 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 I6L893 689 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 PAPSS2O95340 614 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 SLC10A3P09131 477 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 RPS5P46782 204 aaKnown RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 HTR6P50406 440 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 NPRL3Q12980 569 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SPANXN4Q5MJ08 99 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 ARMCX2Q7L311 632 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 KRT73Q86Y46 540 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 SLC44A2Q8IWA5 706 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 VWA5B2Q8N398 1253 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 VANGL1Q8TAA9 524 aaPredicted RBP12.2□□□□□ -0.46
TSKU-203ENST00000527881 TPD52L3Q96J77 140 aa12.2□□□□□ -0.46
TSKU-203ENST00000527881 OR52E6Q96RD3 313 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms