RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SOCS6O14544 535 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 ONECUT2O95948 504 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 ALAS2P22557 587 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 PKLRP30613 574 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 RWDD2BP57060 319 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 PLOD1Q02809 727 aaPredicted RBP22.64■■□□□ 1.21
CPSF1-202ENST00000527827 SPA17Q15506 151 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 SYTL3Q4VX76 610 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 PRAMEF13Q5VWM6 474 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 IGFL2Q6UWQ7 119 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 TTLL10Q6ZVT0 673 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 OVCH1Q7RTY7 1134 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 MCATQ8IVS2 390 aaKnown RBP22.64■■□□□ 1.21
CPSF1-202ENST00000527827 CCDC170Q8IYT3 715 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 FAM71DQ8N9W8 422 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 PPP4R1Q8TF05 950 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 DLG3Q92796 817 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 MENTQ9BUN1 341 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 IMPACTQ9P2X3 320 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 NOVA2Q9UNW9 492 aaKnown RBP22.64■■□□□ 1.21
CPSF1-202ENST00000527827 A0A1B0GX78 115 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 OR1I1O60431 355 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 ZNF189O75820 626 aaPredicted RBP22.63■■□□□ 1.21
CPSF1-202ENST00000527827 OR56A5P0C7T3 313 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 COX15Q7KZN9 410 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 LMNTD1Q8N9Z9 388 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 SPSB2Q99619 263 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 CDC23Q9UJX2 597 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 HS3ST3B1Q9Y662 390 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 DUSP10Q9Y6W6 482 aa22.63■■□□□ 1.21
CPSF1-202ENST00000527827 E2F3O00716 465 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 KDM1AO60341 852 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 ALBP02768 609 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 RAB28P51157 221 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 ARSFP54793 590 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 CSE1LP55060 971 aaKnown RBP22.62■■□□□ 1.21
CPSF1-202ENST00000527827 NKG7Q16617 165 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 CCDC38Q502W7 563 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 C1QL3Q5VWW1 255 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 VRK3Q8IV63 474 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 RNF214Q8ND24 703 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.62■■□□□ 1.21
CPSF1-202ENST00000527827 ALS2CR12Q96Q35 445 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 SLC26A1Q9H2B4 701 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 WDR54Q9H977 334 aa22.62■■□□□ 1.21
CPSF1-202ENST00000527827 CCR7P32248 378 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 CETN2P41208 172 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 TSFMP43897 325 aaKnown RBP22.61■■□□□ 1.21
CPSF1-202ENST00000527827 GDF10P55107 478 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 GRB7Q14451 532 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 DNAJC21Q5F1R6 531 aaKnown RBP22.61■■□□□ 1.21
CPSF1-202ENST00000527827 KIRREL2Q6UWL6 708 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 SLC22A15Q8IZD6 547 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 C2orf73Q8N5S3 287 aaPredicted RBP22.61■■□□□ 1.21
CPSF1-202ENST00000527827 OR13J1Q8NGT2 312 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 DNAJB14Q8TBM8 379 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 GRHL3Q8TE85 626 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 LUC7LQ9NQ29 371 aaKnown RBP22.61■■□□□ 1.21
CPSF1-202ENST00000527827 CIDEBQ9UHD4 219 aa22.61■■□□□ 1.21
CPSF1-202ENST00000527827 DSCR3O14972 297 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 MCM3P25205 808 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 CYLC1P35663 651 aaPredicted RBP22.6■■□□□ 1.21
CPSF1-202ENST00000527827 P3H1Q32P28 736 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 AGAP7PQ5VUJ5 663 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 FCRL6Q6DN72 434 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 SHISA6Q6ZSJ9 500 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 TAB3Q8N5C8 712 aaPredicted RBP22.6■■□□□ 1.21
CPSF1-202ENST00000527827 DENND1AQ8TEH3 1009 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 CALR3Q96L12 384 aaKnown RBP22.6■■□□□ 1.21
CPSF1-202ENST00000527827 AGAP4Q96P64 663 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 IL17FQ96PD4 163 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 TSPY26PQ9H489 355 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 ENAMQ9NRM1 1142 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 CUTCQ9NTM9 273 aa22.6■■□□□ 1.21
CPSF1-202ENST00000527827 PSMD3O43242 534 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 LRRTM2O43300 516 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 PIM1P11309 404 aaPredicted RBP22.59■■□□□ 1.21
CPSF1-202ENST00000527827 CD9P21926 228 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 GRIA3P42263 894 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 TAX1BP1Q86VP1 789 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 PARP9Q8IXQ6 854 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 LRRC57Q8N9N7 239 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 OR52K1Q8NGK4 314 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 LKAAEAR1Q8TD35 194 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 HDAC10Q969S8 669 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 ZNF285Q96NJ3 590 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 SOX17Q9H6I2 414 aaPredicted RBP22.59■■□□□ 1.21
CPSF1-202ENST00000527827 MRM3Q9HC36 420 aaKnown RBP22.59■■□□□ 1.21
CPSF1-202ENST00000527827 CTSFQ9UBX1 484 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 SLC2A6Q9UGQ3 507 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 OSGIN2Q9Y236 505 aa22.59■■□□□ 1.21
CPSF1-202ENST00000527827 R3HDM2Q9Y2K5 976 aaKnown RBP22.59■■□□□ 1.21
CPSF1-202ENST00000527827 GPC4O75487 556 aa22.58■■□□□ 1.21
CPSF1-202ENST00000527827 GOT2P00505 430 aaKnown RBP22.58■■□□□ 1.21
CPSF1-202ENST00000527827 NAP1L1P55209 391 aaKnown RBP22.58■■□□□ 1.21
CPSF1-202ENST00000527827 HSPA14Q0VDF9 509 aa22.58■■□□□ 1.21
CPSF1-202ENST00000527827 Q0VFX4 171 aa22.58■■□□□ 1.21
CPSF1-202ENST00000527827 ZNF169Q14929 603 aaPredicted RBP22.58■■□□□ 1.21
CPSF1-202ENST00000527827 TUBB8Q3ZCM7 444 aa22.58■■□□□ 1.21
CPSF1-202ENST00000527827 FIGLAQ6QHK4 219 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms