RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DNAJC11Q9NVH1 559 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 SLC25A37Q9NYZ2 338 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 MARK1Q9P0L2 795 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 FADS3Q9Y5Q0 445 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 CEPT1Q9Y6K0 416 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 A0A096LPI6 279 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 ELOVL7A1L3X0 281 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 MOSPD3O75425 235 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TCF3P15923 654 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 NNMTP40261 264 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 LRRC26Q2I0M4 334 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 ZXDCQ2QGD7 858 aaPredicted RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 USP51Q70EK9 711 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 DET1Q7L5Y6 550 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 MSRB3Q8IXL7 192 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 DDHD1Q8NEL9 900 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 OR10A6Q8NH74 314 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 MAGEE2Q8TD90 523 aaPredicted RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 HCAR2Q8TDS4 363 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 CYGBQ8WWM9 190 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 FBXL8Q96CD0 374 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TCEAL4Q96EI5 215 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 ZSCAN5AQ9BUG6 496 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 NTN4Q9HB63 628 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TLR9Q9NR96 1032 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 CD84Q9UIB8 345 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 UPK3BL1B0FP48 263 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 FAM220BPB1ANY3 271 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 UPK3BL2E5RIL1 263 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 SLCO2B1O94956 709 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 RETP07949 1114 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 IL1RNP18510 177 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 CDH2P19022 906 aaPredicted RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 S100A3P33764 101 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 NRIP1P48552 1158 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 ZNF77Q15935 545 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 NECAB2Q7Z6G3 386 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 VRK3Q8IV63 474 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 BEND7Q8N7W2 519 aaPredicted RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 FRS2Q8WU20 508 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 MTFMTQ96DP5 389 aaKnown RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 ITCHQ96J02 903 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 LRIG1Q96JA1 1093 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 RDH12Q96NR8 316 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 P2RY13Q9BPV8 354 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 PAIP1Q9H074 479 aaKnown RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 INVSQ9Y283 1065 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 UPK1AO00322 258 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 HPRP00739 348 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 NELFEP18615 380 aaKnown RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 ALDH3A2P51648 485 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 ADARB1P78563 741 aaKnown RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 PLIN5Q00G26 463 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 PYCR3Q53H96 274 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 LRRC73Q5JTD7 316 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 HENMT1Q5T8I9 393 aaKnown RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 LIPJQ5W064 366 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 NEK5Q6P3R8 708 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 OTOP2Q7RTS6 562 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 HSD11B1LQ7Z5J1 315 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 MICU2Q8IYU8 434 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 ZNF786Q8N393 782 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 TMEM132CQ8N3T6 1108 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 CSGALNACT1Q8TDX6 532 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 ELMO1Q92556 727 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 FIG4Q92562 907 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 HHIPQ96QV1 700 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 BEGAINQ9BUH8 593 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 KAT8Q9H7Z6 458 aaKnown RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 DKK3Q9UBP4 350 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 ADGRE2Q9UHX3 823 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 MBD1Q9UIS9 605 aaPredicted RBP14.95□□□□□ -0.02
USH1C-207ENST00000527720 DLGAP4Q9Y2H0 992 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 INSL6Q9Y581 213 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 V9GYQ6 96 aa14.95□□□□□ -0.02
USH1C-207ENST00000527720 C16orf96A6NNT2 1141 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 AREL1O15033 823 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 SGTAO43765 313 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 LEFTY1O75610 366 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 GSTM1P09488 218 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 JUPP14923 745 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 MAPK9P45984 424 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 ARSFP54793 590 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 GSTM4Q03013 218 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 DPY19L1Q2PZI1 675 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 LY6G5CQ5SRR4 150 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 FRG2Q64ET8 278 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 CALHM3Q86XJ0 350 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 MRPL43Q8N983 215 aaKnown RBP14.94□□□□□ -0.02
USH1C-207ENST00000527720 MPP4Q96JB8 637 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 FCRL1Q96LA6 429 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 MRGPRX3Q96LB0 322 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 VPS35Q96QK1 796 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 FRG2BQ96QU4 278 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 IKZF5Q9H5V7 419 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 MAGIXQ9H6Y5 334 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 IL23AQ9NPF7 189 aa14.94□□□□□ -0.02
USH1C-207ENST00000527720 DNAJB9Q9UBS3 223 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms