RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 MCATQ8IVS2 390 aaKnown RBP21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 SLC22A15Q8IZD6 547 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 PPHLN1Q8NEY8 458 aaKnown RBP21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 OR2Y1Q8NGV0 311 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 PRR7Q8TB68 274 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 SLC22A18Q96BI1 424 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 CARD6Q9BX69 1037 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 P4HTMQ9NXG6 502 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 SLC39A10Q9ULF5 831 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 RIMKLBQ9ULI2 386 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 CAPN6Q9Y6Q1 641 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 FER1L5A0AVI2 2057 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 ANKRD12Q6UB98 2062 aa21.54■■□□□ 1.04
TRAPPC4-208ENST00000527680 USP9YO00507 2555 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 SHANK1Q9Y566 2161 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 TCP11X1B4DZS4 312 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 KLHL41O60662 606 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 CD9P21926 228 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 PEBP1P30086 187 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 PKLRP30613 574 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 SF1Q15637 639 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 OASLQ15646 514 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 CYP2A13Q16696 494 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 PLEKHN1Q494U1 663 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 AARS2Q5JTZ9 985 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 PTRHD1Q6GMV3 140 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 TTLL10Q6ZVT0 673 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 ZNF534Q76KX8 674 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 GALNT16Q8N428 558 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 RNF10Q8N5U6 811 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 LMNTD1Q8N9Z9 388 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 Q8NA96 180 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 SPC24Q8NBT2 197 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 SSC4DQ8WTU2 575 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 SKA2Q8WVK7 121 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 DLG3Q92796 817 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 CASS4Q9NQ75 786 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 CATSPERZQ9NTU4 200 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 INTS7Q9NVH2 962 aaKnown RBP21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 TCAF1Q9Y4C2 921 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 ICE1Q9Y2F5 2266 aa21.53■■□□□ 1.04
TRAPPC4-208ENST00000527680 GRIA3P42263 894 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 ARSFP54793 590 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 FOXL2P58012 376 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 SEMA3AQ14563 771 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 MYBPC3Q14896 1274 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 TMED2Q15363 201 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 SLC13A5Q86YT5 568 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 TMEM139Q8IV31 216 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 KRT222Q8N1A0 295 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 DENND1AQ8TEH3 1009 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 IL17FQ96PD4 163 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 ATP13A2Q9NQ11 1180 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 CHRAC1Q9NRG0 131 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 GUCA1BQ9UMX6 200 aa21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 SPTBN1Q01082 2364 aaKnown RBP21.52■■□□□ 1.04
TRAPPC4-208ENST00000527680 CD3EAPO15446 510 aaKnown RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 KRT86O43790 486 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 SEMA7AO75326 666 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 GPC4O75487 556 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 PIM1P11309 404 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 SESN2P58004 480 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 ACVR1Q04771 509 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 MRPL49Q13405 166 aaKnown RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 ZC3H12BQ5HYM0 836 aaKnown RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 MRPL14Q6P1L8 145 aaKnown RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 UNC5DQ6UXZ4 953 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 DCUN1D3Q8IWE4 304 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 IQCKQ8N0W5 287 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 CISD2Q8N5K1 135 aaKnown RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 LINC01555Q8NAE3 123 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 LKAAEAR1Q8TD35 194 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 C19orf60Q96EN9 201 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 PAK5Q9P286 719 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 PLEKHB1Q9UF11 243 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 B3GNT3Q9Y2A9 372 aa21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 USP9XQ93008 2570 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC4-208ENST00000527680 MASP2O00187 686 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 PRMT5O14744 637 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 CNOT3O75175 753 aaKnown RBP21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 IPO13O94829 963 aaKnown RBP21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 S1PR4O95977 384 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 AOAHP28039 575 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 TTPAP49638 278 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 PCID2Q5JVF3 399 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 FIGLAQ6QHK4 219 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 ZADH2Q8N4Q0 377 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 OR2L8Q8NGY9 312 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 TM9SF4Q92544 642 aa21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 SNRNP40Q96DI7 357 aaKnown RBP21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 ILKAPQ9H0C8 392 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 TTC7AQ9ULT0 858 aaPredicted RBP21.5■■□□□ 1.03
TRAPPC4-208ENST00000527680 PCSK5Q92824 1860 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 NDUFS3O75489 264 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 SLCO2B1O94956 709 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 ZSCAN5DPP0CG00 497 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 ITGA3P26006 1051 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 HIST2H2BCQ6DN03 193 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 PPP1R32Q7Z5V6 425 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 RAB42Q8N4Z0 105 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms