RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 LIX1Q8N485 282 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 KRTCAP2Q8N6L1 136 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 PSMA8Q8TAA3 256 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 CCDC115Q96NT0 180 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 KLQ9UEF7 1012 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 RIMKLBQ9ULI2 386 aa12.24□□□□□ -0.45
CAPN1-208ENST00000527323 TNPO3Q9Y5L0 923 aaKnown RBP12.24□□□□□ -0.45
CAPN1-208ENST00000527323 IGLV3-10A0A075B6K4 115 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 RGS14O43566 566 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 MYO1DO94832 1006 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF682O95780 498 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 FADS2O95864 444 aaKnown RBP12.23□□□□□ -0.45
CAPN1-208ENST00000527323 OTCP00480 354 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 GSTT2P0CG29 244 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 GSTT2BP0CG30 244 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 IGFBP5P24593 272 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 OR1D2P34982 312 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 RGRP47804 291 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 ST13P50502 369 aaKnown RBP12.23□□□□□ -0.45
CAPN1-208ENST00000527323 NCS1P62166 190 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 CTSL3PQ5NE16 218 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 CACHD1Q5VU97 1274 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 DSG4Q86SJ6 1040 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 ZNF540Q8NDQ6 660 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 PIK3C3Q8NEB9 887 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 NETO1Q8TDF5 533 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 MTFMTQ96DP5 389 aaKnown RBP12.23□□□□□ -0.45
CAPN1-208ENST00000527323 VMP1Q96GC9 406 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 YME1L1Q96TA2 773 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 APOL5Q9BWW9 433 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 INTS6Q9UL03 887 aaKnown RBP12.23□□□□□ -0.45
CAPN1-208ENST00000527323 OR7A17O14581 309 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 ANKRD28O15084 1053 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 GPR39O43194 453 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 PGRP06401 933 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 GDF5P43026 501 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 PCYT1AP49585 367 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 ARHGDIAP52565 204 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 RFX4Q33E94 735 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 INAVAQ3KP66 663 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 FUT10Q6P4F1 479 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 SCAIQ8N9R8 606 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 SETD9Q8NE22 299 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 SUSD3Q96L08 255 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 VN1R3Q9BXE9 311 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 NSUN3Q9H649 340 aaKnown RBP12.23□□□□□ -0.45
CAPN1-208ENST00000527323 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 NUDT4Q9NZJ9 180 aa12.23□□□□□ -0.45
CAPN1-208ENST00000527323 GABARAPO95166 117 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 MYCLP1P12525 358 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 SERPINB1P30740 379 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 RYKP34925 604 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 MINDY2Q8NBR6 621 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 RHBDF1Q96CC6 855 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 TRIT1Q9H3H1 467 aaKnown RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ABCB10Q9NRK6 738 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 DCAF13Q9NV06 445 aaKnown RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 SLC25A37Q9NYZ2 338 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 UBA2Q9UBT2 640 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 GMPPBQ9Y5P6 360 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 DRGXA6NNA5 263 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 H0Y626 953 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 RECQL5O94762 991 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 TRIM16O95361 564 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 TPTEP56180 551 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 DSC1Q08554 894 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ACOX1Q15067 660 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
CAPN1-208ENST00000527323 FKBP9P1Q75LS8 142 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 OR6Q1Q8NGQ2 317 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ULK4Q96C45 1275 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 TRIB3Q96RU7 358 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 CORO1BQ9BR76 489 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ALOXE3Q9BYJ1 711 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 NECTIN3Q9NQS3 549 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 PCDHB14Q9Y5E9 798 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 FRMPD3Q5JV73 1810 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 F5H5T6 163 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 STK25O00506 426 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 RAD51BO15315 384 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 INSIG1O15503 277 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 FFAR2O15552 330 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 FAM20BO75063 409 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ULK1O75385 1050 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 EOMESO95936 686 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 TACR2P21452 398 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 GNPDA1P46926 289 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 TAF10Q12962 218 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 RUNDC3AQ59EK9 446 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 CES5AQ6NT32 575 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 PLEKHG7Q6ZR37 379 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ANKRD46Q86W74 232 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 NPAS4Q8IUM7 802 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 ZDHHC21Q8IVQ6 265 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 PAF1Q8N7H5 531 aa12.22□□□□□ -0.45
CAPN1-208ENST00000527323 HTRA1Q92743 480 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms