RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PDLIM3Q53GG5 364 aaPredicted RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 BAIAP2L2Q6UXY1 529 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 R3HCC1LQ7Z5L2 792 aaKnown RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 ARID3BQ8IVW6 561 aaPredicted RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 OR4N5Q8IXE1 308 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 KLHDC1Q8N7A1 406 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 ANKRD42Q8N9B4 389 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 OR52N5Q8NH56 324 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 GATAD1Q8WUU5 269 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 ZUFSPQ96AP4 578 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 RRP36Q96EU6 259 aaKnown RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 CNRIP1Q96F85 164 aaPredicted RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 C1orf74Q96LT6 269 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 OR2A14Q96R47 310 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 OR6C1Q96RD1 312 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 RPS6KC1Q96S38 1066 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 C16orf70Q9BSU1 422 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 THAP2Q9H0W7 228 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 PPCSQ9HAB8 311 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 PAG1Q9NWQ8 432 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 OSER1Q9NX31 292 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 RRN3Q9NYV6 651 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 THAP10Q9P2Z0 257 aaPredicted RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 AMACRQ9UHK6 382 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 TSPAN16Q9UKR8 245 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 IKZF3Q9UKT9 509 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 NENFQ9UMX5 172 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 MTMR6Q9Y217 621 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 A0A1W2PPH5 198 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 KRTAP4-16G5E9R7 235 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 SSX4O60224 188 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 RNASEH1O60930 286 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 RSL1D1O76021 490 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 TRUB2O95900 331 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 PYGLP06737 847 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 CDH3P22223 829 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 TPD52P55327 224 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 MED22Q15528 200 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 DLG2Q15700 870 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 FAM189A2Q15884 450 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 RSBN1Q5VWQ0 802 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 CLEC17AQ6ZS10 378 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 DIS3L2Q8IYB7 885 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 AFAP1Q8N556 730 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 C11orf42Q8N5U0 333 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 POC5Q8NA72 575 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 ETNPPLQ8TBG4 499 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 APOBEC4Q8WW27 367 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 ARHGEF2Q92974 986 aaKnown RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 CALML4Q96GE6 196 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 SPAG5Q96R06 1193 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 UBAC1Q9BSL1 405 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 ADNPQ9H2P0 1102 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 PLK3Q9H4B4 646 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 CHMP1AQ9HD42 196 aaPredicted RBP1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 GTSE1Q9NYZ3 720 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 EHD2Q9NZN4 543 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 DAPK2Q9UIK4 370 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 SLC6A5Q9Y345 797 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 CMAHPQ9Y471 501 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 WIPI2Q9Y4P8 454 aa1.99□□□□□ -2.09
ECHDC1-219ENST00000526299 ENO4A6NNW6 628 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 H0Y9J4 135 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 HS6ST1O60243 411 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 ZNF354AO60765 605 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 PRKAR1AP10644 381 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 DARSP14868 501 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 BSGP35613 385 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 IKQ13123 557 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 KRT33BQ14525 404 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 ZNF74Q16587 644 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 MS4A18Q3C1V0 323 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 LCLAT1Q6UWP7 414 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 CCBE1Q6UXH8 406 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 CFAP77Q6ZQR2 320 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 G2E3Q7L622 706 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 HEATR4Q86WZ0 1026 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 SCYL3Q8IZE3 742 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 ARHGAP24Q8N264 748 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 ESX1Q8N693 406 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 RTL3Q8N8U3 475 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 OR11H4Q8NGC9 324 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 MAP3K3Q99759 626 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 BTBD10Q9BSF8 475 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 YTHDF1Q9BYJ9 559 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 AGXT2Q9BYV1 514 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 MIS12Q9H081 205 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 TAS2R14Q9NYV8 317 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 B3GAT1Q9P2W7 334 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 SLC13A4Q9UKG4 626 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 PA2G4Q9UQ80 394 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 COMMD10Q9Y6G5 202 aa1.98□□□□□ -2.09
ECHDC1-219ENST00000526299 FAM205AQ6ZU69 1335 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 IGHV4-30-2A0A087WSY4 118 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 TRIM49BA6NDI0 452 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 FAM220BPB1ANY3 271 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 SNAP91O60641 907 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 LY6G6DO95868 133 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 THY1P04216 161 aa1.97□□□□□ -2.09
ECHDC1-219ENST00000526299 MGMTP16455 207 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms