RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 IFT81Q8WYA0 676 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 PDLIM5Q96HC4 596 aaKnown RBP12.14□□□□□ -0.47
VEGFA-225ENST00000523950 OR2A14Q96R47 310 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 OR6C1Q96RD1 312 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 FANCEQ9HB96 536 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 SMYD2Q9NRG4 433 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 INTS7Q9NVH2 962 aaKnown RBP12.14□□□□□ -0.47
VEGFA-225ENST00000523950 SOHLH2Q9NX45 425 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 PLAGL1Q9UM63 463 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
VEGFA-225ENST00000523950 B3GALT1Q9Y5Z6 326 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 PSAT1Q9Y617 370 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 AKAP13Q12802 2813 aa12.14□□□□□ -0.47
VEGFA-225ENST00000523950 ACACBO00763 2458 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 SLC9B1P1A6NJY1 282 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 ISM1B1AKI9 464 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 AGRPO00253 132 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 CYP2A7P20853 494 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 OAS2P29728 719 aaKnown RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 ECHS1P30084 290 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 ABCG1P45844 678 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 SLC12A2P55011 1212 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 UCNP55089 124 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TUBB4BP68371 445 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 SH3BP2P78314 561 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 POU4F1Q01851 419 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 FOXM1Q08050 763 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TUBB3Q13509 450 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 MAP7Q14244 749 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 SLMAPQ14BN4 828 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 KBTBD12Q3ZCT8 623 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 GRTP1Q5TC63 336 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 BROXQ5VW32 411 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 UBE2R2Q712K3 238 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 PIWIL4Q7Z3Z4 852 aaKnown RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 CTAGE3PQ8IX95 158 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 NKAPQ8N5F7 415 aaKnown RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 LINC01555Q8NAE3 123 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 FLVCR1-AS1Q8TAF5 88 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 FBF1Q8TES7 1133 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TSPAN17Q96FV3 270 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TCTN2Q96GX1 697 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 ELMO2Q96JJ3 720 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TRAPPC9Q96Q05 1148 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 RBBP8Q99708 897 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 FUT8Q9BYC5 575 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 SPHK1Q9NYA1 384 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 FOXJ2Q9P0K8 574 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TSR3Q9UJK0 312 aaKnown RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 RARRES3Q9UL19 164 aa12.13□□□□□ -0.47
VEGFA-225ENST00000523950 TMEM184BQ9Y519 407 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-225ENST00000523950 CEP295Q9C0D2 2601 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 PABPN1LA6NDY0 278 aaKnown RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 CXorf49A8MYA2 514 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 PRICKLE3O43900 615 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 EBLN1P0CF75 366 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 FOLR1P15328 257 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 ST6GAL1P15907 406 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 ZNF37AP17032 561 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 PEBP1P30086 187 aaKnown RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 SPRP35270 261 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 CCSMST1Q4G0I0 132 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 DTX1Q86Y01 620 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 SPACA3Q8IXA5 215 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 C19orf47Q8N9M1 422 aaKnown RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 LMNTD1Q8N9Z9 388 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 MCOLN3Q8TDD5 553 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 DENND1AQ8TEH3 1009 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 EEF1AKMT1Q8WVE0 214 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 SMPDL3AQ92484 453 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 IL17FQ96PD4 163 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 CYTH2Q99418 400 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 GPR22Q99680 433 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 NRTNQ99748 197 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 OLFM1Q99784 485 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 SLC12A9Q9BXP2 914 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 APMAPQ9HDC9 416 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 FGF21Q9NSA1 209 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 NINJ2Q9NZG7 142 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 SDK2Q58EX2 2172 aa12.12□□□□□ -0.47
VEGFA-225ENST00000523950 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
VEGFA-225ENST00000523950 KLK10O43240 276 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 STK17BO94768 372 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 CCNDBP1O95273 360 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 TSPAN12O95859 305 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 MT-ND3P03897 115 aa12.11□□□□□ -0.47
VEGFA-225ENST00000523950 ENO2P09104 434 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-225ENST00000523950 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-225ENST00000523950 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms