RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 EEDO75530 441 aaKnown RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 BCAS2O75934 225 aaPredicted RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 VHLP40337 213 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 HALP42357 657 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 GNPDA1P46926 289 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 SLC7A2P52569 658 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 ATXN3P54252 364 aaPredicted RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 COL19A1Q14993 1142 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 PON2Q15165 354 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 IMPG1Q17R60 797 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 ZFAND4Q86XD8 727 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 IL17RCQ8NAC3 791 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 FBXO15Q8NCQ5 510 aaPredicted RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 OR56A3Q8NH54 315 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 HM13Q8TCT9 377 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 SELENOMQ8WWX9 145 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 NECTIN4Q96NY8 510 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 OR4K3Q96R72 315 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 LRTM1Q9HBL6 345 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 GMPR2Q9P2T1 348 aaKnown RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 EYSQ5T1H1 3165 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 MGAT4DA6NG13 374 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 CCDC154A6NI56 674 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 SEC22BO75396 215 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 CD22P20273 847 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 COL9A1P20849 921 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 ADGRE1Q14246 886 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 CAPRIN1Q14444 709 aaKnown RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 AGERQ15109 404 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 KLK6Q92876 244 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 LRRC58Q96CX6 371 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 MED8Q96G25 268 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 HOPXQ9BPY8 73 aaPredicted RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 SUCOQ9UBS9 1254 aaKnown RBP16.38■□□□□ 0.21
SREK1-212ENST00000522912 SLC23A2Q9UGH3 650 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 SNX6Q9UNH7 406 aa16.38■□□□□ 0.21
SREK1-212ENST00000522912 ACADLP28330 430 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 PRKG2Q13237 762 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 TRIM25Q14258 630 aaKnown RBP16.37■□□□□ 0.21
SREK1-212ENST00000522912 INPP5AQ14642 412 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 KIAA0040Q15053 153 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 TIGD2Q4W5G0 525 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 SAMD4BQ5PRF9 694 aaKnown RBP16.37■□□□□ 0.21
SREK1-212ENST00000522912 TRMT11Q7Z4G4 463 aaKnown RBP16.37■□□□□ 0.21
SREK1-212ENST00000522912 HOMEZQ8IX15 550 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 BHLHE22Q8NFJ8 381 aaPredicted RBP16.37■□□□□ 0.21
SREK1-212ENST00000522912 PCDHAC1Q9H158 963 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 ELOVL6Q9H5J4 265 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 MRPL40Q9NQ50 206 aaKnown RBP16.37■□□□□ 0.21
SREK1-212ENST00000522912 GID8Q9NWU2 228 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 NMRK1Q9NWW6 199 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 C1orf109Q9NX04 203 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 EIF3LQ9Y262 564 aaKnown RBP16.37■□□□□ 0.21
SREK1-212ENST00000522912 LRRC42Q9Y546 428 aa16.37■□□□□ 0.21
SREK1-212ENST00000522912 A0A1W2PQF6 199 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 E7EQ34 232 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 NME4O00746 187 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 KLF8O95600 359 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 PAK4O96013 591 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 JUPP14923 745 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 IRF8Q02556 426 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 PTGR1Q14914 329 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 IRF4Q15306 451 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SUSD1Q6UWL2 747 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SLC15A3Q8IY34 581 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SPDYE1Q8NFV5 336 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 GANCQ8TET4 914 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 ZNF480Q8WV37 535 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 ASB9Q96DX5 294 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 TEX101Q9BY14 249 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 ZDHHC5Q9C0B5 715 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 OR52A5Q9H2C5 316 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 DPEP2Q9H4A9 486 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 ABCD2Q9UBJ2 740 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 LEF1Q9UJU2 399 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 PRR23AA6NEV1 266 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 JAK1P23458 1154 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SLC6A2P23975 617 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 PLOD1Q02809 727 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 NFYCQ13952 458 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 STARD3Q14849 445 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 XKR6Q5GH73 641 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SWT1Q5T5J6 900 aaKnown RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 LIPJQ5W064 366 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 FRG2Q64ET8 278 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 SDE2Q6IQ49 451 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 PRMT9Q6P2P2 845 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 LIX1Q8N485 282 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 RNF175Q8N4F7 328 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 LMNTD1Q8N9Z9 388 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 TP53I13Q8NBR0 393 aaPredicted RBP16.36■□□□□ 0.21
SREK1-212ENST00000522912 FAM131CQ96AQ9 280 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 FRG2BQ96QU4 278 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 TM7SF3Q9NS93 570 aa16.36■□□□□ 0.21
SREK1-212ENST00000522912 CMTM6Q9NX76 183 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms