RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PSMC6P62333 389 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 PHEXP78562 749 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TRDNQ13061 729 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 RRS1Q15050 365 aaKnown RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 RBBP5Q15291 538 aaKnown RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TAF7Q15545 349 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZSCAN26Q16670 478 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MTHFSDQ2M296 383 aaKnown RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 CCDC183Q5T5S1 534 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 GARNL3Q5VVW2 1013 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ALS2CLQ60I27 953 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 GPR139Q6DWJ6 353 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZSCAN25Q6NSZ9 544 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 C19orf48Q6RUI8 117 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 CASC1Q6TDU7 716 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ENOSF1Q7L5Y1 443 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 SMIM29Q86T20 159 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TICAM2Q86XR7 235 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 LINC00346Q8IVM7 164 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 DCUN1D3Q8IWE4 304 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 L3MBTL4Q8NA19 623 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLC24A4Q8NFF2 622 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 NEK11Q8NG66 645 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MOSPD2Q8NHP6 518 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 GOLGA5Q8TBA6 731 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 SEMA4DQ92854 862 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMCO6Q96DC7 493 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ERLEC1Q96DZ1 483 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MTERF3Q96E29 417 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ST6GAL2Q96JF0 529 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 C17orf77Q96MU5 243 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 OR6C1Q96RD1 312 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 CDRT15Q96T59 188 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 APOBEC3GQ9HC16 384 aaKnown RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZBTB20Q9HC78 741 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TRPC7Q9HCX4 862 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF334Q9HCZ1 680 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLC35C2Q9NQQ7 365 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MIOSQ9NXC5 875 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TAAR2Q9P1P5 351 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 RABGAP1Q9Y3P9 1069 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 NME7Q9Y5B8 376 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 NRXN3Q9Y4C0 1643 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 NOTCH4Q99466 2003 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 SBNO1A3KN83 1393 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TNRQ92752 1358 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 USP6P35125 1406 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ATP10DQ9P241 1426 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ARHGAP23Q9P227 1491 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 DIP2AQ14689 1571 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 C3P01024 1663 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 ELOVL7A1L3X0 281 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 USP27XA6NNY8 438 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRR32B1ATL7 298 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 TSPAN1O60635 241 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 LMX1BO60663 402 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 ERAL1O75616 437 aaKnown RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 CREG1O75629 220 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 GCNT3O95395 438 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 KRT19P08727 400 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 MT3P25713 68 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 RAD52P43351 418 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 LIG4P49917 911 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF75DP51815 510 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 IFI35P80217 286 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 CCZ1BP86790 482 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 CCZ1P86791 482 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 CDK3Q00526 305 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 PLA2G7Q13093 441 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 DMP1Q13316 513 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 MFAP5Q13361 173 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 STPG1Q5TH74 334 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 NAA16Q6N069 864 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 C16orf54Q6UWD8 224 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 LINGO4Q6UY18 593 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM43BQ6ZT52 329 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 TRMT1LQ7Z2T5 733 aaKnown RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 CEP57Q86XR8 500 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 POMGNT2Q8NAT1 580 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 AVL9Q8NBF6 648 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 CCDC112Q8NEF3 446 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 MNS1Q8NEH6 495 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 TSPAN14Q8NG11 270 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 WDR20Q8TBZ3 569 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 TAS1R2Q8TE23 839 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 LPGAT1Q92604 370 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 SYAP1Q96A49 352 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAM81BQ96LP2 452 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 GCNAQ96QF7 691 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 NODALQ96S42 347 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 APOL6Q9BWW8 343 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMX4Q9H1E5 349 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 TFB2MQ9H5Q4 396 aaKnown RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLA2Q9H6Q3 261 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLC38A7Q9NVC3 462 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 NKIRAS2Q9NYR9 191 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 GDE1Q9NZC3 331 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 FAF1Q9UNN5 650 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 GRIP1Q9Y3R0 1128 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 MAP3K19Q56UN5 1328 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms