RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 FANCEQ9HB96 536 aa12.08□□□□□ -0.48
TRAPPC9-206ENST00000519482 NINJ2Q9NZG7 142 aa12.08□□□□□ -0.48
TRAPPC9-206ENST00000519482 TP53TG5Q9Y2B4 290 aa12.08□□□□□ -0.48
TRAPPC9-206ENST00000519482 MAN2B2Q9Y2E5 1009 aa12.08□□□□□ -0.48
TRAPPC9-206ENST00000519482 ACTL7BQ9Y614 415 aa12.08□□□□□ -0.48
TRAPPC9-206ENST00000519482 GSAPA4D1B5 854 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 MROH6A6NGR9 719 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 SLC9B1P1A6NJY1 282 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 E7ESA3 106 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 BTN3A3O00478 584 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 LIN7AO14910 233 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 MAP3K7O43318 606 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 CDH16O75309 829 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 SHBGP04278 402 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 KLK3P07288 261 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 GSTA2P09210 222 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 ETS1P14921 441 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 PDHA2P29803 388 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 PRDX3P30048 256 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 ARCN1P48444 511 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 SARNPP82979 210 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 CDK16Q00536 496 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 CDH17Q12864 832 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 SEMA5AQ13591 1074 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 LAMB3Q13751 1172 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 BOP1Q14137 746 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 ITIH4Q14624 930 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 DBN1Q16643 649 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 UGT8Q16880 541 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 CLDN19Q8N6F1 224 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 OR52E1Q8NGJ3 308 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 CPT1BQ92523 772 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 TFGQ92734 400 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 MR1Q95460 341 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 LRRC39Q96DD0 335 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 PITPNM3Q9BZ71 974 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 SAYSD1Q9NPB0 183 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 LGALS13Q9UHV8 139 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 FARSAQ9Y285 508 aaKnown RBP12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
TRAPPC9-206ENST00000519482 SEC16AO15027 2179 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 C2orf74A8MZ97 194 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 BTN3A1O00481 513 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 ACSL3O95573 720 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 FTH1P02794 183 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 RAB40ALP0C0E4 278 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PRSS56P0CW18 603 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 FDFT1P37268 417 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 GNGT1P63211 74 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PLOD1Q02809 727 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 LYPLAL1Q5VWZ2 237 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PACS1Q6VY07 963 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 TMEM135Q86UB9 458 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 AMIGO1Q86WK6 493 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PIANPQ8IYJ0 282 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 DSELQ8IZU8 1212 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 SLC38A9Q8NBW4 561 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PHC3Q8NDX5 983 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PYROXD1Q8WU10 500 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 PPM1MQ96MI6 270 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 RIMKLBQ9ULI2 386 aa12.06□□□□□ -0.48
TRAPPC9-206ENST00000519482 SNRNP200O75643 2136 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 MED13Q9UHV7 2174 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 HEATR9A2RTY3 570 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 F8W8V4 182 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 MEN1O00255 615 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 SUN1O94901 812 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 HBQ1P09105 142 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 OR56A5P0C7T3 313 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 ST6GAL1P15907 406 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 FOXN2P32314 431 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 PREPP48147 710 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 FOXK1P85037 733 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 PDIA2Q13087 525 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 PLEKHS1Q5SXH7 462 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 ASB18Q6ZVZ8 466 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 PALM2Q8IXS6 379 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 TBC1D21Q8IYX1 336 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 ADGRF3Q8IZF5 1079 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 DNAAF3Q8N9W5 541 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 TEX19Q8NA77 164 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 OR52K1Q8NGK4 314 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 OR1L3Q8NH93 324 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.05□□□□□ -0.485e-7■■■■■ 72.6
TRAPPC9-206ENST00000519482 CLIP3Q96DZ5 547 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 TRAPPC9Q96Q05 1148 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 RANBP9Q96S59 729 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 TTC1Q99614 292 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 DPH2Q9BQC3 489 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 NLNQ9BYT8 704 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 ACTR5Q9H9F9 607 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 LRRC4CQ9HCJ2 640 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 PIH1D1Q9NWS0 290 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 POLG2Q9UHN1 485 aa12.05□□□□□ -0.48
TRAPPC9-206ENST00000519482 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms