RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KIF19Q2TAC6 998 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SV2CQ496J9 727 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 IQCCQ4KMZ1 466 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 AARDQ4LEZ3 155 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PAN2Q504Q3 1202 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 INO80DQ53TQ3 878 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 C2CD6Q53TS8 623 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 DCAF17Q5H9S7 520 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 STEAP3Q658P3 488 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 BICRALQ6AI39 1079 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 EFCAB12Q6NXP0 572 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC27A4Q6P1M0 643 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CFAP161Q6P656 301 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM111BQ6SJ93 734 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 TEX261Q6UWH6 196 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 KIAA1324Q6UXG2 1013 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RPTNQ6XPR3 784 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CFAP77Q6ZQR2 320 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC16A12Q6ZSM3 486 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GDPD3Q7L5L3 318 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 COPS6Q7L5N1 327 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OTOP1Q7RTM1 612 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OVCH2Q7RTZ1 564 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FRMD5Q7Z6J6 570 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MILR1Q7Z6M3 343 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GALNT10Q86SR1 603 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 TAC4Q86UU9 113 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 HIPK1Q86Z02 1210 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 AQP12AQ8IXF9 295 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZZZ3Q8IYH5 903 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CPNE9Q8IYJ1 553 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 UNC5BQ8IZJ1 945 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZDHHC14Q8IZN3 488 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CPXCR1Q8N123 301 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 METTL4Q8N3J2 472 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPATA6LQ8N4H0 392 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ARHGEF39Q8N4T4 335 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NAT8LQ8N9F0 302 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 WDSUB1Q8N9V3 476 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 LINC01356Q8N9X3 169 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 TP53I13Q8NBR0 393 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF540Q8NDQ6 660 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR156Q8NFN8 814 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 BPIFB6Q8NFQ5 453 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 KBTBD8Q8NFY9 601 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OR52H1Q8NGJ2 320 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GOT1L1Q8NHS2 421 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 WDR36Q8NI36 951 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 DYNC2LI1Q8TCX1 351 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ST7LQ8TDW4 575 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FCGR1BQ92637 280 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RORBQ92753 470 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PTERQ96BW5 349 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MRPL48Q96GC5 212 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 AURKBQ96GD4 344 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CALML4Q96GE6 196 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CENPNQ96H22 339 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 HSFY1Q96LI6 401 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCDC17Q96LX7 622 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF512Q96ME7 567 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PTCHD1Q96NR3 888 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCNL2Q96S94 520 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 DCLRE1CQ96SD1 692 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NPAS1Q99742 590 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SSX3Q99909 188 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PTDSS2Q9BVG9 487 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 BRIP1Q9BX63 1249 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ANO3Q9BYT9 981 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RAB34Q9BZG1 259 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR63Q9BZJ6 419 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR88Q9GZN0 384 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ROGDIQ9GZN7 287 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 DNTTIP1Q9H147 329 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FN3KQ9H479 309 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PDZD7Q9H5P4 517 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 UNKLQ9H9P5 680 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CYP3A43Q9HB55 503 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SAYSD1Q9NPB0 183 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 KRT84Q9NSB2 600 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OLA1Q9NTK5 396 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CCM2LQ9NUG4 571 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLCXD1Q9NUJ7 323 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FAM49BQ9NUQ9 324 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SMPD3Q9NY59 655 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RDH8Q9NYR8 311 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CD274Q9NZQ7 290 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MED11Q9P086 117 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 TMEM216Q9P0N5 145 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SIRPGQ9P1W8 387 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 IFT80Q9P2H3 777 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 LRP2BPQ9P2M1 347 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 AFF4Q9UHB7 1163 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 BTNL2Q9UIR0 455 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NENFQ9UMX5 172 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SHOC2Q9UQ13 582 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAP3K2Q9Y2U5 619 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MRPS23Q9Y3D9 190 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NR2E1Q9Y466 385 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAB21L2Q9Y586 359 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PCDHGB6Q9Y5F9 930 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms