RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 RAB28P51157 221 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 DUSP3P51452 185 aaPredicted RBP9.57□□□□□ -0.88
CLN8-202ENST00000517514 PDX1P52945 283 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 EPHA4P54764 986 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 GFERP55789 205 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 CLDN6P56747 220 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 DAB2P98082 770 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 CDKL1Q00532 357 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 FBXO48Q5FWF7 155 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 AMIGO1Q86WK6 493 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 GPSM1Q86YR5 675 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 FAM20CQ8IXL6 584 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 KLHDC8AQ8IYD2 350 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 AVL9Q8NBF6 648 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 OR6C4Q8NGE1 309 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 OR56A3Q8NH54 315 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 STAG3L4Q8TBR4 150 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 MCOLN3Q8TDD5 553 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 LCN9Q8WX39 176 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 NAT6Q93015 286 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 ESAMQ96AP7 390 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 SH3KBP1Q96B97 665 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 RHBDF1Q96CC6 855 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 FAM122AQ96E09 287 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 APOPT1Q96IL0 206 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 CCDC138Q96M89 665 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 OR2A14Q96R47 310 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 SLC38A3Q99624 504 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 NUDT22Q9BRQ3 303 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 ABCG4Q9H172 646 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 CENPHQ9H3R5 247 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 LRRN3Q9H3W5 708 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 DLL3Q9NYJ7 618 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 NCKIPSDQ9NZQ3 722 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 SPATA7Q9P0W8 599 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 CPSF2Q9P2I0 782 aaKnown RBP9.57□□□□□ -0.88
CLN8-202ENST00000517514 PTBP2Q9UKA9 531 aaKnown RBP9.57□□□□□ -0.88
CLN8-202ENST00000517514 ATXN7L1Q9ULK2 861 aaPredicted RBP9.57□□□□□ -0.88
CLN8-202ENST00000517514 SH2B3Q9UQQ2 575 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 PLLPQ9Y342 182 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 ACTL7BQ9Y614 415 aa9.57□□□□□ -0.88
CLN8-202ENST00000517514 CNOT1A5YKK6 2376 aaKnown RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 FAM221BA6H8Z2 402 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 NCF1BA6NI72 391 aaPredicted RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 NCF1CA8MVU1 366 aaPredicted RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 OPA1O60313 960 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 DLX3O60479 287 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PRAMEF4O60810 478 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 GLRA3O75311 464 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 C9P02748 559 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 RPN2P04844 631 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 GP1BAP07359 652 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 CHRM5P08912 532 aaPredicted RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 NCF1P14598 390 aaPredicted RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 EPORP19235 508 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PSMB5P28074 263 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 SHMT2P34897 504 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 GGT5P36269 586 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 ETV4P43268 484 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 CAPZBP47756 277 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 SLC6A12P48065 614 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 KPNA2P52292 529 aaKnown RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 PNLIPRP1P54315 467 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 AP1S2P56377 157 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 MAGOHP61326 146 aaKnown RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 KRT33BQ14525 404 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 ARHGAP19Q14CB8 494 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PLCL1Q15111 1095 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PRAMEF9Q5VWM5 478 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 AGTRAPQ6RW13 159 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 SUSD1Q6UWL2 747 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 USP53Q70EK8 1073 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 CROCCP2Q86T23 111 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 TAX1BP1Q86VP1 789 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 LCA5Q86VQ0 697 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 CNPY4Q8N129 248 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 TCP10LQ8TDR4 215 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 EXT2Q93063 718 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PYCR2Q96C36 320 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 MOCOSQ96EN8 888 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 OR4K3Q96R72 315 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 MRPL57Q9BQC6 102 aaKnown RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 SGPP1Q9BX95 441 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 ATG10Q9H0Y0 220 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 MRPL46Q9H2W6 279 aaKnown RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 SRMSQ9H3Y6 488 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 ACSS2Q9NR19 701 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 INTS7Q9NVH2 962 aaKnown RBP9.56□□□□□ -0.88
CLN8-202ENST00000517514 ARL15Q9NXU5 204 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 KCNK4Q9NYG8 393 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 NUDT4Q9NZJ9 180 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 OR6C2Q9NZP2 312 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PDP2Q9P2J9 529 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 EPHA6Q9UF33 1036 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 DCDC2Q9UHG0 476 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 RNF112Q9ULX5 631 aa9.56□□□□□ -0.88
CLN8-202ENST00000517514 PCDHGA1Q9Y5H4 931 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms