RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 GFYI3L273 518 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 K7EQG2 157 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 K7N7A8 449 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 KLK10O43240 276 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 TLX2O43763 284 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ECE2O60344 883 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 SRPX2O60687 465 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PRKRAO75569 313 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ACTL6BO94805 426 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 SEC24AO95486 1093 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ECDO95905 644 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PIGRP01833 764 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4L2P0CJ85 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4L3P0CJ86 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4L5P0CJ88 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4L6P0CJ89 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4L7P0CJ90 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 SLC2A2P11168 524 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 MMP9P14780 707 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CRISP2P16562 243 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 FGFR2P21802 821 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CA4P22748 312 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 SHMT1P34896 483 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 MDH2P40926 338 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 GPD2P43304 727 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CCR3P51677 355 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ACTA2P62736 377 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ACTC1P68032 377 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IRX4P78413 519 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PRKCZQ05513 592 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CHRNDQ07001 517 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 TNFRSF9Q07011 255 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 MAD2L1Q13257 205 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PDE7AQ13946 482 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CYLC2Q14093 348 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DCTN1Q14203 1278 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 FAM50AQ14320 339 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DECR1Q16698 335 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CCDC144BQ3MJ40 725 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 COBLL1Q53SF7 1204 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 NHLRC3Q5JS37 347 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZNF506Q5JVG8 444 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IFIT1BQ5T764 474 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 C9orf66Q5T8R8 295 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 LCN1P1Q5VSP4 162 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 EMBQ6PCB8 327 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 GJB7Q6PEY0 223 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 CCDC174Q6PII3 467 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4L9Q6RFH8 374 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IL34Q6ZMJ4 242 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DENND5BQ6ZUT9 1274 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ADGRG6Q86SQ4 1221 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZNF695Q8IW36 515 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 KIRREL3Q8IZU9 778 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PRSS35Q8N3Z0 413 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 MAPKAPK5-AS1Q8N8E1 139 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 BEST2Q8NFU1 509 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IPO4Q8TEX9 1081 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 AENQ8WTP8 325 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 NCSTNQ92542 709 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 HSPH1Q92598 858 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IQCDQ96DY2 449 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 C10orf90Q96M02 699 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 RUNDC3BQ96NL0 473 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 BBS4Q96RK4 519 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PIGSQ96S52 555 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 HNRNPABQ99729 332 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ASPSCR1Q9BZE9 553 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 OCR1Q9BZK8 76 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ULBP2Q9BZM5 246 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DDX24Q9GZR7 859 aaKnown RBP eCLIP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 UBQLN3Q9H347 655 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 MARCH7Q9H992 704 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 RETNQ9HD89 108 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PCDH12Q9NPG4 1184 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 HINT3Q9NQE9 182 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 LIN7CQ9NUP9 197 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 NLGN3Q9NZ94 848 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 TMEM9Q9P0T7 183 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ARMCX1Q9P291 453 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 DUX4Q9UBX2 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZNF391Q9UJN7 358 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZNF346Q9UL40 294 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 L1RE1Q9UN81 338 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 GTF3C3Q9Y5Q9 886 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ARHGAP23Q9P227 1491 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 LTBP4Q8N2S1 1624 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 GTF3C1Q12789 2109 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 A0A0A6YYC8 382 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 IQANK1A0A1B0GTG1 560 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 A0A1W2PPC4 97 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 KANSL1LA0AUZ9 987 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 A8MU76 341 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 I3L1I5 382 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 K7EQD1 137 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 VCYO14598 125 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 AREL1O15033 823 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 LRRTM2O43300 516 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 DNPH1O43598 174 aa-0.38□□□□□ -2.47
SNORA40.17-201ENST00000517256 SPRY1O43609 319 aaPredicted RBP-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms