RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 MICU2Q8IYU8 434 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 ZNF786Q8N393 782 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 SVOPLQ8N434 492 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 CHST14Q8NCH0 376 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 PNPT1Q8TCS8 783 aaKnown RBP14.48□□□□□ -0.09
NUP54-217ENST00000514987 CSGALNACT1Q8TDX6 532 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 SLC22A17Q8WUG5 538 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 DTNBP1Q96EV8 351 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 PIF1Q9H611 641 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 MARK1Q9P0L2 795 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 DKK3Q9UBP4 350 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 RSL24D1Q9UHA3 163 aaKnown RBP14.48□□□□□ -0.09
NUP54-217ENST00000514987 ZNHIT2Q9UHR6 403 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 ADGRE2Q9UHX3 823 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 TMPRSS11EQ9UL52 423 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 MAPRE3Q9UPY8 281 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 INVSQ9Y283 1065 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 NEUROG3Q9Y4Z2 214 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 CEPT1Q9Y6K0 416 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 MTCL1Q9Y4B5 1905 aaKnown RBP14.48□□□□□ -0.09
NUP54-217ENST00000514987 MYOCOSA0A1B0GUC4 107 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 UPK3BL1B0FP48 263 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 UPK3BL2E5RIL1 263 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ZNF701M0R085 212 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 SLCO2B1O94956 709 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 BMP1P13497 986 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 JUPP14923 745 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ETS2P15036 469 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 MAP4P27816 1152 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 HOXA9P31269 272 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 NRIP1P48552 1158 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CDK9P50750 372 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 ADARB1P78563 741 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 SEMG2Q02383 582 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 DAG1Q14118 895 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ZNF284Q2VY69 593 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CYBRD1Q53TN4 286 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 LDLRAP1Q5SW96 308 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 FRG2Q64ET8 278 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 SUSD1Q6UWL2 747 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ISLR2Q6UXK2 745 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 USP51Q70EK9 711 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 KLHDC8AQ8IYD2 350 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 BEND7Q8N7W2 519 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 DDHD1Q8NEL9 900 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 OR10A6Q8NH74 314 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 MAGEE2Q8TD90 523 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 STARD8Q92502 1023 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ELMO1Q92556 727 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 MPP4Q96JB8 637 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 FRG2BQ96QU4 278 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 TCF25Q9BQ70 676 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 PAIP1Q9H074 479 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 USP22Q9UPT9 525 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CCL26Q9Y258 94 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 INSL6Q9Y581 213 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CEP350Q5VT06 3117 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CXCR6O00574 342 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 WNT9AO14904 365 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 RECQL5O94762 991 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 ASLP04424 464 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 GSTM1P09488 218 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 LINC00271P0C7V0 271 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CDH2P19022 906 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 PRPS1L1P21108 318 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 XPAP23025 273 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 CCR2P41597 374 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 TRPC1P48995 793 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 GSTM4Q03013 218 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 PCDH1Q08174 1060 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ABRQ12979 859 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 TEAD2Q15562 447 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 RFLNAQ6ZTI6 216 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 DPPA4Q7L190 304 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 DET1Q7L5Y6 550 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 GPR149Q86SP6 731 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CALHM3Q86XJ0 350 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 ZDHHC13Q8IUH4 622 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 KIAA1958Q8N8K9 716 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 MRPL43Q8N983 215 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 FIG4Q92562 907 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 FAM162AQ96A26 154 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 FAM120BQ96EK7 910 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 FCRL1Q96LA6 429 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 VPS35Q96QK1 796 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 CPPED1Q9BRF8 314 aaPredicted RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 C11orf49Q9H6J7 331 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 KAT8Q9H7Z6 458 aaKnown RBP14.47□□□□□ -0.09
NUP54-217ENST00000514987 IL23AQ9NPF7 189 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 LIMD1Q9UGP4 676 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 PCDHGA11Q9Y5H2 935 aa14.47□□□□□ -0.09
NUP54-217ENST00000514987 TRIM43BA6NCK2 446 aa14.46□□□□□ -0.09
NUP54-217ENST00000514987 NRG2O14511 850 aaPredicted RBP14.46□□□□□ -0.09
NUP54-217ENST00000514987 SRPRAP08240 638 aaKnown RBP14.46□□□□□ -0.09
NUP54-217ENST00000514987 GNAO1P09471 354 aa14.46□□□□□ -0.09
NUP54-217ENST00000514987 HNRNPA1P09651 372 aaKnown RBP eCLIP14.46□□□□□ -0.09
NUP54-217ENST00000514987 HSD3B1P14060 373 aa14.46□□□□□ -0.09
NUP54-217ENST00000514987 HSD3B2P26439 372 aa14.46□□□□□ -0.09
NUP54-217ENST00000514987 MTHFRP42898 656 aa14.46□□□□□ -0.09
NUP54-217ENST00000514987 CCR3P51677 355 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms