RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 NIPA2Q8N8Q9 360 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 Q8N9G6 341 aaPredicted RBP6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 OR10H5Q8NGA6 315 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 OR52N2Q8NGI0 321 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 ZNF564Q8TBZ8 553 aaPredicted RBP6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 TBC1D15Q8TC07 691 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 PATE1Q8WXA2 126 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 NUS1Q96E22 293 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 HIC2Q96JB3 615 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 PSKH2Q96QS6 385 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 CCDC3Q9BQI4 270 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 EDEM3Q9BZQ6 932 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 PRORYQ9H606 182 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 CPNE5Q9HCH3 593 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 NT5MQ9NPB1 228 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 PADI4Q9UM07 663 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 GPR34Q9UPC5 381 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 FER1L5A0AVI2 2057 aa6.32□□□□□ -1.4
HMGN1P17-201ENST00000513734 TLN1Q9Y490 2541 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 BSNQ9UPA5 3926 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ZNF785A8K8V0 405 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ISM1B1AKI9 464 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 B4DGG1 531 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 EIF3CLB5ME19 914 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 D6RAR5 112 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 NTN3O00634 580 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 KPNA5O15131 536 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 TPD52L2O43399 206 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 HEXIM1O94992 359 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 AGFG2O95081 481 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PGLSO95336 258 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RPLP0P05388 317 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 HLA-DQB2P05538 268 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 MMP2P08253 660 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 CDK4P11802 303 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 AK4P27144 223 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 SSR1P43307 286 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 MMP13P45452 471 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PRIM2P49643 509 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 KIAA1024LP59773 190 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 AP1S1P61966 158 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 YPEL5P62699 121 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 NSUN2Q08J23 767 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PIGHQ14442 188 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 KRT81Q14533 505 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RFTN1Q14699 578 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ASTE1Q2TB18 679 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 CCDC122Q5T0U0 273 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PPP1R2P3Q6NXS1 205 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PNCKQ6P2M8 343 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ALKBH5Q6P6C2 394 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 DOK6Q6PKX4 331 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RBM44Q6ZP01 1051 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ZSCAN30Q86W11 494 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 HEATR4Q86WZ0 1026 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PSTKQ8IV42 348 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ATPAF2Q8N5M1 289 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 FITM2Q8N6M3 262 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PAF1Q8N7H5 531 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ARL10Q8N8L6 244 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 OR56A4Q8NGH8 313 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 FAM71BQ8TC56 605 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 HCAR2Q8TDS4 363 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 TEKT4Q8WW24 435 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 PIH1D2Q8WWB5 315 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RAPGEF5Q92565 580 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 SYN2Q92777 582 aaPredicted RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 FGF11Q92914 225 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 SCAMP4Q969E2 229 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 MIEF2Q96C03 454 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 DTD2Q96FN9 168 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 NUDCD1Q96RS6 583 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RBM15Q96T37 977 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 AGAP2Q99490 1192 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 EIF3CQ99613 913 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 CHP1Q99653 195 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 SEMA3CQ99985 751 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 C1QTNF7Q9BXJ2 289 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 ABCG4Q9H172 646 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 POLR1BQ9H9Y6 1135 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 MRPL47Q9HD33 250 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 SPATS2LQ9NUQ6 558 aaKnown RBP6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RLIMQ9NVW2 624 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 MOSPD1Q9UJG1 213 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 TFR2Q9UP52 801 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 HYOU1Q9Y4L1 999 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 TTLL3Q9Y4R7 772 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 DGKBQ9Y6T7 804 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 RNF215Q9Y6U7 377 aa6.31□□□□□ -1.4
HMGN1P17-201ENST00000513734 MED13Q9UHV7 2174 aa6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 TNRC6AQ8NDV7 1962 aaKnown RBP6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 C3orf70A6NLC5 250 aaPredicted RBP6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 CAPN14A8MX76 684 aa6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 CDRT15L2A8MXV6 281 aa6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 PROSCO94903 275 aa6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 EML2O95834 649 aa6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 CTSEP14091 401 aa6.3□□□□□ -1.4
HMGN1P17-201ENST00000513734 DESP17661 470 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms