RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CLEC18AA5D8T8 446 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 GPR39O43194 453 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 TJP3O95049 919 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 IPO7O95373 1038 aaKnown RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 GSTM1P09488 218 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 RAB40ALP0C0E4 278 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 MSL3P1P0C860 447 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 RBP3P10745 1247 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ATP1B2P14415 290 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 POLR2CP19387 275 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 NR1D1P20393 614 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 CYP2A7P20853 494 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 PTPN7P35236 360 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ADRA1AP35348 466 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 CYLC1P35663 651 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 CD151P48509 253 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 PRLHRP49683 370 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 CCL11P51671 97 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 KPNA2P52292 529 aaKnown RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 RRADP55042 308 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 EIF3EP60228 445 aaKnown RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 RPA4Q13156 261 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 GPR19Q15760 415 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 DOPEY1Q5JWR5 2465 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ANKRD20A2Q5SQ80 823 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ANKRD20A1Q5TYW2 823 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ANKRD20A3Q5VUR7 823 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 IZUMO3Q5VZ72 239 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 CAPRIN2Q6IMN6 1127 aaKnown RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 DUS1LQ6P1R4 473 aaKnown RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 FAM199XQ6PEV8 388 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 DARS2Q6PI48 645 aaKnown RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 SARM1Q6SZW1 724 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 CLEC18BQ6UXF7 455 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 SNX20Q7Z614 316 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 TMEM135Q86UB9 458 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 HOOK3Q86VS8 718 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 HPS6Q86YV9 775 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 NXPE1Q8N323 547 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 CLEC18CQ8NCF0 446 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 OR4E2Q8NGC2 313 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ACTL9Q8TC94 416 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ZNF501Q96CX3 271 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 CLIP3Q96DZ5 547 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 RMDN2Q96LZ7 410 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 SPATA13Q96N96 652 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ALS2CR12Q96Q35 445 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 TBL1YQ9BQ87 522 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 C17orf62Q9BQA9 187 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 DPH2Q9BQC3 489 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 NLNQ9BYT8 704 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 SLC7A5P2Q9GIP4 190 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ING2Q9H160 280 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 MVB12BQ9H7P6 319 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ACTR5Q9H9F9 607 aaPredicted RBP6.97□□□□□ -1.29
USP46-208ENST00000512656 SERTAD3Q9UJW9 196 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 POMT2Q9UKY4 750 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ZNF451Q9Y4E5 1061 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 PCDHA3Q9Y5H8 950 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 PCDHA13Q9Y5I0 950 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
USP46-208ENST00000512656 SEC16AO15027 2179 aa6.96□□□□□ -1.29
USP46-208ENST00000512656 CCDC66A2RUB6 948 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 GOLGA6L9A6NEM1 432 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 ARGFXA6NJG6 315 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 SLC9B1P1A6NJY1 282 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 AGAP14A8MT82 685 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 C2orf74A8MZ97 194 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 C9J4A7 227 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 F8W8V4 182 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 K7EM74 188 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 QSOX1O00391 747 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 KCNN4O15554 427 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 PJA2O43164 708 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 KDM1AO60341 852 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 KLHL41O60662 606 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 DPM1O60762 260 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 LCA5LO95447 670 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 IGHEP01854 428 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 PTMAP06454 111 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 CD63P08962 238 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 AGXTP21549 392 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 PSMB4P28070 264 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 NTF4P34130 210 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 CA5AP35218 305 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 CTNNA1P35221 906 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 ARCN1P48444 511 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 MARCKSL1P49006 195 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 MLLT10P55197 1068 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 NAP1L1P55209 391 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 ITGA1P56199 1179 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 RWDD2BP57060 319 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 RPS18P62269 152 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 XIAPP98170 497 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 OTUD4Q01804 1114 aaKnown RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 TBX2Q13207 712 aaPredicted RBP6.96□□□□□ -1.3
USP46-208ENST00000512656 GPS2Q13227 327 aa6.96□□□□□ -1.3
USP46-208ENST00000512656 PTPRCAPQ14761 206 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms