RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 NCBP1Q09161 790 aaKnown RBP6.05□□□□□ -1.44
CHD1-208ENST00000512392 TRAP1Q12931 704 aaKnown RBP6.05□□□□□ -1.44
CHD1-208ENST00000512392 GPS2Q13227 327 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 GPR176Q14439 515 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 LY6KQ17RY6 165 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 DCAF12L2Q5VW00 463 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 SPECC1LQ69YQ0 1117 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 FOXR2Q6PJQ5 311 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 ZC3H14Q6PJT7 736 aaKnown RBP6.05□□□□□ -1.44
CHD1-208ENST00000512392 ASPGQ86U10 573 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 ZC3H18Q86VM9 953 aaKnown RBP6.05□□□□□ -1.44
CHD1-208ENST00000512392 ZSWIM9Q86XI8 627 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 GPR65Q8IYL9 337 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 TMEFF1Q8IYR6 380 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 PYROXD2Q8N2H3 581 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 BCORP1Q8N888 145 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 PHOSPHO2Q8TCD6 241 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 IGDCC4Q8TDY8 1250 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 FCGR1BQ92637 280 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 OTUB1Q96FW1 271 aaPredicted RBP6.05□□□□□ -1.44
CHD1-208ENST00000512392 SENP8Q96LD8 212 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 MUS81Q96NY9 551 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 GPA33Q99795 319 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 ATG10Q9H0Y0 220 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 KCNK15Q9H427 330 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 TMEM231Q9H6L2 316 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 LRRC19Q9H756 370 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 NLKQ9UBE8 527 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.05□□□□□ -1.44
CHD1-208ENST00000512392 RNF215Q9Y6U7 377 aa6.05□□□□□ -1.44
CHD1-208ENST00000512392 MAST3O60307 1309 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SPATA31A1Q5TZJ5 1347 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SPATA31A5Q5VU36 1347 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SPATA31A7Q8IWB4 1347 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 GOLGA8TH3BQL2 631 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 HAS3O00219 553 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 RNF13O43567 381 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 CDK14O94921 469 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 STAG3L1P0CL83 205 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 GLI4P10075 376 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 F3P13726 295 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PRKACAP17612 351 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TCN1P20061 433 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 CSNK1EP49674 416 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 ATP12AP54707 1039 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 DRAP1Q14919 205 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 FAM47AQ5JRC9 791 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 DHRS7BQ6IAN0 325 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 TRIM65Q6PJ69 517 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ZNF704Q6ZNC4 412 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 PHLDB2Q86SQ0 1253 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ZNF605Q86T29 641 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 KIAA1328Q86T90 577 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 LRRC6Q86X45 466 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 MISPQ8IVT2 679 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 GPR137CQ8N3F9 429 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 FAM86B1Q8N7N1 296 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 DQX1Q8TE96 717 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 LIN37Q96GY3 246 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 TAAR6Q96RI8 345 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 KCNS3Q9BQ31 491 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ALG12Q9BV10 488 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 GTPBP2Q9BX10 602 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 ZNF275Q9NSD4 429 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 DDX28Q9NUL7 540 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 FKBP14Q9NWM8 211 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 HIF1ANQ9NWT6 349 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SAE1Q9UBE0 346 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 PISDQ9UG56 409 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 RAPGEFL1Q9UHV5 662 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 GGA2Q9UJY4 613 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 CDC42EP3Q9UKI2 254 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PCDHA12Q9UN75 941 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TCP11X1B4DZS4 312 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 E7ENQ6 273 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ZNF701M0R085 212 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 CES2O00748 559 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 KLF11O14901 512 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SEC14L5O43304 696 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PSPNO60542 156 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 SERPINI2O75830 405 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 KRT36O76013 467 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PGLSO95336 258 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 IGFBP2P18065 325 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 DRD4P21917 467 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 RRM2P31350 389 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 ARPC4P59998 168 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TIAL1Q01085 375 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHD1-208ENST00000512392 ROR2Q01974 943 aaKnown RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 CCNIQ14094 377 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PDIA5Q14554 519 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 KCNMB1Q16558 191 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PARP6Q2NL67 630 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 HKDC1Q2TB90 917 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 CCDC14Q49A88 953 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 GXYLT1Q4G148 440 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TIGD5Q53EQ6 642 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 TMEM63BQ5T3F8 832 aa6.04□□□□□ -1.44
CHD1-208ENST00000512392 PRSS55Q6UWB4 352 aaPredicted RBP6.04□□□□□ -1.44
CHD1-208ENST00000512392 NLRX1Q86UT6 975 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms