RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ABI3Q9P2A4 366 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 SEC14L3Q9UDX4 400 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 TINAGQ9UJW2 476 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 TDRKHQ9Y2W6 561 aaKnown RBP18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 MAU2Q9Y6X3 613 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 TRAV17A0A0B4J275 112 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 ISM1B1AKI9 464 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 PRR35P0CG20 571 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 RALBP11234 206 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 ZFXP17010 805 aaPredicted RBP18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 ADRA1AP35348 466 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 GRIA3P42263 894 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 KLC1Q07866 573 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 INAQ16352 499 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 XKRXQ6PP77 449 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 RANBP10Q6VN20 620 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 SIRT6Q8N6T7 355 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 LINC01555Q8NAE3 123 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 CPLX3Q8WVH0 158 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 HAS2Q92819 552 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 ULK4Q96C45 1275 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 C10orf88Q9H8K7 445 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 ZDHHC3Q9NYG2 299 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 ASF1AQ9Y294 204 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 HYOU1Q9Y4L1 999 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 PRSS21Q9Y6M0 314 aa18.19■□□□□ 0.5
HMGCS1-206ENST00000511774 TRBV5-4A0A0C4DH59 114 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 C2orf81A6NN90 581 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 BHMG1C9JSJ3 638 aaPredicted RBP18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 COX6A1P12074 109 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 CDKN2BP42772 138 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 ARSFP54793 590 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 BRD3Q15059 726 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 TAZQ16635 292 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 FILIP1LQ4L180 1135 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 ATG9BQ674R7 924 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 MTFR2Q6P444 385 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 SNX20Q7Z614 316 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 SERPINA9Q86WD7 417 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 ACBD4Q8NC06 268 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 MTFMTQ96DP5 389 aaKnown RBP18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 C14orf79Q96F83 325 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 CRB3Q9BUF7 120 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 FSD1LQ9BXM9 530 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 OR6C2Q9NZP2 312 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 NEU2Q9Y3R4 380 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 AKAP6Q13023 2319 aa18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 PRRC2AP48634 2157 aaKnown RBP18.18■□□□□ 0.5
HMGCS1-206ENST00000511774 DYTNA2CJ06 578 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 C5orf60A6NFR6 353 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 CFAP99D6REC4 459 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 SLC19A2O60779 497 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 WDPCPO95876 746 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 H2AFZP0C0S5 128 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 ACPPP15309 386 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 ITGALP20701 1170 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 CAPN3P20807 821 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 ACRV1P26436 265 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 TNNT3P45378 269 aaPredicted RBP18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 FANCCQ00597 558 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 TLE4Q04727 773 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 TYRO3Q06418 890 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 ARHGEF18Q6ZSZ5 1173 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 H2AFVQ71UI9 128 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 LAPTM4BQ86VI4 370 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 KBTBD2Q8IY47 623 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 PIANPQ8IYJ0 282 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 TBC1D21Q8IYX1 336 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 C2orf73Q8N5S3 287 aaPredicted RBP18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 STT3BQ8TCJ2 826 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 HAUS1Q96CS2 278 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 ZNF285Q96NJ3 590 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 MENTQ9BUN1 341 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 STOX2Q9P2F5 926 aaPredicted RBP18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 CIDEBQ9UHD4 219 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 RSPH14Q9UHP6 348 aa18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 NXT1Q9UKK6 140 aaKnown RBP18.17■□□□□ 0.5
HMGCS1-206ENST00000511774 CST8O60676 142 aa18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 MC4RP32245 332 aa18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 NR2C2P49116 596 aa18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 KIR2DS3Q14952 304 aa18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 DENND5AQ6IQ26 1287 aa18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 OR5K2Q8NHB8 316 aa18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 CTNNBL1Q8WYA6 563 aaPredicted RBP18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 DNAJC1Q96KC8 554 aaKnown RBP18.16■□□□□ 0.5
HMGCS1-206ENST00000511774 MAP2K7O14733 419 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 ZNHIT1O43257 154 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 NRP2O60462 931 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 USP1O94782 785 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 RASAL1O95294 804 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 CLDN14O95500 239 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 ZGLP1P0C6A0 271 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 PIM1P11309 404 aaPredicted RBP18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 TNNT1P13805 278 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 AGAP20933 346 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 PKLRP30613 574 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 DBN1Q16643 649 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 KAZNQ674X7 775 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 NLRP9Q7RTR0 991 aa18.15■□□□□ 0.5
HMGCS1-206ENST00000511774 SLC35G2Q8TBE7 412 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms