RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ZNF132P52740 706 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 ST3GAL1Q11201 340 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 BYSLQ13895 437 aaKnown RBP6.32□□□□□ -1.4
USP53-206ENST00000510737 CTXN3Q4LDR2 81 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 GLRA4Q5JXX5 417 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 C20orf194Q5TEA3 1177 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 NCAPH2Q6IBW4 605 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 UNQ6126/PRO20091Q6UXV3 157 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 TMTC3Q6ZXV5 915 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 MIER3Q7Z3K6 550 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 MB21D2Q8IYB1 491 aaPredicted RBP6.32□□□□□ -1.4
USP53-206ENST00000510737 CMTM8Q8IZV2 173 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 ALLCQ8N6M5 410 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 TRIML1Q8N9V2 468 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 BEST2Q8NFU1 509 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 USP13Q92995 863 aaPredicted RBP6.32□□□□□ -1.4
USP53-206ENST00000510737 PSMG2Q969U7 264 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 NXPE2Q96DL1 559 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 CEP170P1Q96L14 293 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 ARNT2Q9HBZ2 717 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 WRAP73Q9P2S5 460 aaPredicted RBP6.32□□□□□ -1.4
USP53-206ENST00000510737 GAB2Q9UQC2 676 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
USP53-206ENST00000510737 GON4LQ3T8J9 2241 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 HELZP42694 1942 aaKnown RBP6.31□□□□□ -1.4
USP53-206ENST00000510737 IGHV4OR15-8A0A075B7B6 117 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ACKR2O00590 384 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 TNFSF14O43557 240 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 OR4Q2P0C623 313 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ZNF883P0CG24 379 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 GJC1P36383 396 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 OPRD1P41143 372 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 PSMC5P62195 406 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 BTKQ06187 659 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 PDGFRLQ15198 375 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 HLA-BQ31612 363 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 SLC36A4Q6YBV0 504 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 FOXL2NBQ6ZUU3 175 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 MON1AQ86VX9 555 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ERICH1Q86X53 443 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 CCDC117Q8IWD4 279 aaPredicted RBP6.31□□□□□ -1.4
USP53-206ENST00000510737 RDM1Q8NG50 284 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 EXOC6Q8TAG9 804 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ARRDC2Q8TBH0 407 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ZNF385AQ96PM9 386 aaKnown RBP6.31□□□□□ -1.4
USP53-206ENST00000510737 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 C1QTNF5Q9BXJ0 243 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 LINC00597Q9H2U6 94 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 FAM124BQ9H5Z6 455 aaPredicted RBP6.31□□□□□ -1.4
USP53-206ENST00000510737 EBF2Q9HAK2 575 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 LRRC4Q9HBW1 653 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ARFGAP3Q9NP61 516 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 ZDHHC4Q9NPG8 344 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 XPNPEP1Q9NQW7 623 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 BARHL2Q9NY43 387 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 OR6C3Q9NZP0 311 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 BCCIPQ9P287 314 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP53-206ENST00000510737 PI4KAP42356 2102 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 NID2Q14112 1375 aa6.31□□□□□ -1.4
USP53-206ENST00000510737 IGHV1OR15-9A0A0B4J2B8 117 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CPED1A4D0V7 1026 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 H0Y3Z8 333 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 KIF1CO43896 1103 aaKnown RBP6.3□□□□□ -1.4
USP53-206ENST00000510737 ZG16O60844 167 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CLDN14O95500 239 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 KLF8O95600 359 aaPredicted RBP6.3□□□□□ -1.4
USP53-206ENST00000510737 ARL2P36404 184 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 ZBTB17Q13105 803 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 DMP1Q13316 513 aaPredicted RBP6.3□□□□□ -1.4
USP53-206ENST00000510737 THOC5Q13769 683 aaKnown RBP6.3□□□□□ -1.4
USP53-206ENST00000510737 MXD4Q14582 209 aaPredicted RBP6.3□□□□□ -1.4
USP53-206ENST00000510737 EMC2Q15006 297 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 RUNDC3AQ59EK9 446 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 SH2D4BQ5SQS7 431 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 ANKRD45Q5TZF3 282 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CENPPQ6IPU0 288 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CLEC18BQ6UXF7 455 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 TMEM150AQ86TG1 271 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 EXOC8Q8IYI6 725 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 MAB21L3Q8N8X9 362 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CCDC26Q8TAB7 109 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 SNRNP27Q8WVK2 155 aaKnown RBP6.3□□□□□ -1.4
USP53-206ENST00000510737 TCP11Q8WWU5 503 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CCDC136Q96JN2 1154 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CSF3RQ99062 836 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 PDZD7Q9H5P4 517 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 TMLHEQ9NVH6 421 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 GDAQ9Y2T3 454 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 ASB3Q9Y575 518 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 CLDN16Q9Y5I7 305 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 PTPRDP23468 1912 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 LRRK2Q5S007 2527 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 BSNQ9UPA5 3926 aa6.3□□□□□ -1.4
USP53-206ENST00000510737 SMIM28A0A1B0GU29 152 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 TCRBV21S2A2A0A5A6 115 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 HNRNPCL2B2RXH8 293 aa6.29□□□□□ -1.4
USP53-206ENST00000510737 FLRT2O43155 660 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms