RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DET1Q7L5Y6 550 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 NLRP9Q7RTR0 991 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 WDR53Q7Z5U6 358 aaPredicted RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 YTHDF3Q7Z739 585 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 NOP9Q86U38 636 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 AMIGO1Q86WK6 493 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 BEST3Q8N1M1 668 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 DNAJC22Q8N4W6 341 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ATPAF2Q8N5M1 289 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 RASGEF1AQ8N9B8 481 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 TMEM178AQ8NBL3 297 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 DENND1AQ8TEH3 1009 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 FAM222BQ8WU58 562 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 DHTKD1Q96HY7 919 aaPredicted RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 UTP23Q9BRU9 249 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 TDRD1Q9BXT4 1180 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 GPR63Q9BZJ6 419 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 POLR1EQ9GZS1 481 aaKnown RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 TP63Q9H3D4 680 aaPredicted RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 BPIFA1Q9NP55 256 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 NLRC4Q9NPP4 1024 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 CUTCQ9NTM9 273 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 EURLQ9NYK6 297 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 ACSL5Q9ULC5 683 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 DNMT3AQ9Y6K1 912 aaPredicted RBP6.87□□□□□ -1.31
VCAN-207ENST00000507162 NUP210LQ5VU65 1888 aa6.87□□□□□ -1.31
VCAN-207ENST00000507162 IGHV1-45A0A0A0MS14 117 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 MGAT4DA6NG13 374 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 DSCR3O14972 297 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT1A9O60656 530 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 DNAJB6O75190 326 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ONECUT2O95948 504 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 NEFLP07196 543 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ICAM2P13598 275 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT2B7P16662 529 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 DESP17661 470 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT1A6P19224 532 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT1A1P22309 533 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 MMP8P22894 467 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 CES1P23141 567 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 MCM3P25205 808 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 RPL26P61254 145 aaKnown RBP6.86□□□□□ -1.31
VCAN-207ENST00000507162 NIPAL4Q0D2K0 466 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 DAZAP2Q15038 168 aaPredicted RBP6.86□□□□□ -1.31
VCAN-207ENST00000507162 POU4F3Q15319 338 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 FLYWCH1Q4VC44 716 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ACER2Q5QJU3 275 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 FNBP1LQ5T0N5 605 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ERMARDQ5T6L9 678 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 SLC25A25Q6KCM7 469 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 TIGD7Q6NT04 549 aaPredicted RBP6.86□□□□□ -1.31
VCAN-207ENST00000507162 KDELC1Q6UW63 502 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 TMC3Q7Z5M5 1100 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 CXorf67Q86X51 503 aaPredicted RBP6.86□□□□□ -1.31
VCAN-207ENST00000507162 LIX1LQ8IVB5 337 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 CFAP206Q8IYR0 622 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ADGRF3Q8IZF5 1079 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 MDS2Q8NDY4 140 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 OR52E1Q8NGJ3 308 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 NAT14Q8WUY8 206 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 NELFBQ8WX92 580 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ZNF592Q92610 1267 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 CCDC34Q96HJ3 373 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ZNF354BQ96LW1 612 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 RMDN2Q96LZ7 410 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 SGPP1Q9BX95 441 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT1A7Q9HAW7 530 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT1A10Q9HAW8 530 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 UGT1A8Q9HAW9 530 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 RIC8BQ9NVN3 520 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 CWC15Q9P013 229 aaKnown RBP6.86□□□□□ -1.31
VCAN-207ENST00000507162 ADAM22Q9P0K1 906 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 MKL2Q9ULH7 1088 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 RPL26L1Q9UNX3 145 aaKnown RBP6.86□□□□□ -1.31
VCAN-207ENST00000507162 HEBP2Q9Y5Z4 205 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 ALG6Q9Y672 507 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 NBEAL2Q6ZNJ1 2754 aa6.86□□□□□ -1.31
VCAN-207ENST00000507162 SIGLEC16A6NMB1 481 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 EIF3CLB5ME19 914 aaKnown RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 CLDN4O14493 209 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 TFECO14948 347 aaPredicted RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 PRPSAP2O60256 369 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 PRMT3O60678 531 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 SMC2O95347 1197 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 HEXBP07686 556 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 SP1P08047 785 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 NID1P14543 1247 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 RFC3P40938 356 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 CDH6P55285 790 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 DCDC1P59894 354 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 RPL7AP62424 266 aaKnown RBP6.85□□□□□ -1.31
VCAN-207ENST00000507162 AP2B1P63010 937 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 KRTAP24-1Q3LI83 254 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 ACAD10Q6JQN1 1059 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 DCUN1D2Q6PH85 259 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 TMCO3Q6UWJ1 677 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 UNC5DQ6UXZ4 953 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 DAAM2Q86T65 1068 aa6.85□□□□□ -1.31
VCAN-207ENST00000507162 LILRA3Q8N6C8 439 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms