RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 Q6ZS92 163 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 PID1Q7Z2X4 250 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 TRIM73Q86UV7 250 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 ZC3H18Q86VM9 953 aaKnown RBP8.74□□□□□ -1.01
DHFR-202ENST00000504396 AMIGO1Q86WK6 493 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 MCEMP1Q8IX19 187 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 ZNF655Q8N720 491 aaPredicted RBP8.74□□□□□ -1.01
DHFR-202ENST00000504396 C19orf47Q8N9M1 422 aaKnown RBP8.74□□□□□ -1.01
DHFR-202ENST00000504396 PHC3Q8NDX5 983 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 OR52E1Q8NGJ3 308 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 OR2Y1Q8NGV0 311 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 DNAJB14Q8TBM8 379 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 GRHL3Q8TE85 626 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 COG1Q8WTW3 980 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 HEXDCQ8WVB3 486 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 NACC2Q96BF6 587 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 PTERQ96BW5 349 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 MAGEB10Q96LZ2 347 aaPredicted RBP8.74□□□□□ -1.01
DHFR-202ENST00000504396 FCRL5Q96RD9 977 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 NRTNQ99748 197 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 AP1M1Q9BXS5 423 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 PITPNM3Q9BZ71 974 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 COG4Q9H9E3 785 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 VPS37BQ9H9H4 285 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 DDX56Q9NY93 547 aaKnown RBP8.74□□□□□ -1.01
DHFR-202ENST00000504396 SAE1Q9UBE0 346 aaPredicted RBP8.74□□□□□ -1.01
DHFR-202ENST00000504396 CDC23Q9UJX2 597 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 AP1M2Q9Y6Q5 423 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 CENPEQ02224 2701 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 CELSR2Q9HCU4 2923 aa8.74□□□□□ -1.01
DHFR-202ENST00000504396 UQCRHLA0A096LP55 91 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 C17orf113A0A1B0GUU1 675 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 GAPDHSO14556 408 aaPredicted RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 UQCRHP07919 91 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 TMEM253P0C7T8 217 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 CD68P34810 354 aaPredicted RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 SLC1A1P43005 524 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 PRLHRP49683 370 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 SOX8P57073 446 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 AIMP2Q13155 320 aaKnown RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 TFDP2Q14188 446 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 ZNF169Q14929 603 aaPredicted RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 SLC18A3Q16572 532 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 AGAP7PQ5VUJ5 663 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 SP5Q6BEB4 398 aaPredicted RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 SPESP1Q6UW49 350 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 PPP1R32Q7Z5V6 425 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 KCNMB4Q86W47 210 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 RHOT2Q8IXI1 618 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 OR4K2Q8NGD2 314 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 PROKR1Q8TCW9 393 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 PPP4R1Q8TF05 950 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 ULK4Q96C45 1275 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 HAUS1Q96CS2 278 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 OXNAD1Q96HP4 312 aaPredicted RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 AGAP4Q96P64 663 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 BARD1Q99728 777 aaKnown RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 NDC1Q9BTX1 674 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 FICDQ9BVA6 458 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 CHRNA10Q9GZZ6 450 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 SPRTNQ9H040 489 aaPredicted RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 FAM96AQ9H5X1 160 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 EPS8L2Q9H6S3 715 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 COPG2Q9UBF2 871 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 FBXL4Q9UKA2 621 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 PRRC2CQ9Y520 2896 aaKnown RBP8.73□□□□□ -1.01
DHFR-202ENST00000504396 POLEQ07864 2286 aa8.73□□□□□ -1.01
DHFR-202ENST00000504396 ANKRD12Q6UB98 2062 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 AGAP14A8MT82 685 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 AGPSO00116 658 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 AGTP01019 485 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 GHRHP01286 108 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 SNRPB2P08579 225 aaKnown RBP8.72□□□□□ -1.01
DHFR-202ENST00000504396 GSTM1P09488 218 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 EDN3P14138 238 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 ATP1B2P14415 290 aaPredicted RBP8.72□□□□□ -1.01
DHFR-202ENST00000504396 PECAM1P16284 738 aaPredicted RBP8.72□□□□□ -1.01
DHFR-202ENST00000504396 ITGALP20701 1170 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 CD151P48509 253 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 GSTM4Q03013 218 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 WASHC5Q12768 1159 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 DOC2BQ14184 412 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 IQCB1Q15051 598 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 ZXDCQ2QGD7 858 aaPredicted RBP8.72□□□□□ -1.01
DHFR-202ENST00000504396 NKAIN1Q4KMZ8 207 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 PRAMEF13Q5VWM6 474 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 RHBDD2Q6NTF9 364 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 ZNF567Q8N184 647 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 P3H4Q92791 437 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.72□□□□□ -1.013e-18■■■■□ 25.9
DHFR-202ENST00000504396 COPS8Q99627 209 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 APOL2Q9BQE5 337 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 TFB2MQ9H5Q4 396 aaKnown RBP8.72□□□□□ -1.01
DHFR-202ENST00000504396 MVB12BQ9H7P6 319 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 FAM60AQ9NP50 221 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 SLC6A20Q9NP91 592 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 OLAHQ9NV23 265 aa8.72□□□□□ -1.01
DHFR-202ENST00000504396 ITGB1BP2Q9UKP3 347 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms