RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TGIF2LYQ8IUE0 185 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 SPPL2CQ8IUH8 684 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 OR5AR1Q8NGP9 310 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 CA5BP1Q8WTZ4 195 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 RAPGEF5Q92565 580 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 ULK4Q96C45 1275 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 C8orf44Q96CB5 159 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 OLFM3Q96PB7 478 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 COPS8Q99627 209 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 TREX2Q9BQ50 279 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 MESP1Q9BRJ9 268 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 MAK16Q9BXY0 300 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 RNF32Q9H0A6 362 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 POLG2Q9UHN1 485 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 OR5H15A6NDH6 313 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 C2orf81A6NN90 581 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 NFKB1P19838 968 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 MAGP20916 626 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 PMP22Q01453 160 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 MYL5Q02045 173 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 KIR2DS3Q14952 304 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 FAM214AQ32MH5 1076 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 KRTCAP3Q53RY4 240 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 TFDP3Q5H9I0 405 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 TCTE1Q5JU00 501 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 ATG9BQ674R7 924 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 SLC9A4Q6AI14 798 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 HIBCHQ6NVY1 386 aaPredicted RBP15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 CNSTQ6PJW8 725 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 NPNTQ6UXI9 565 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 METTL27Q8N6F8 245 aaPredicted RBP15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 TTC29Q8NA56 475 aaPredicted RBP15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 IPMKQ8NFU5 416 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 OR4K2Q8NGD2 314 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 STT3BQ8TCJ2 826 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 THAP3Q8WTV1 239 aaPredicted RBP15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 MIEF2Q96C03 454 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 MRGPRX2Q96LB1 330 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 FKBPLQ9UIM3 349 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 C3orf18Q9UK00 162 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 ASF1AQ9Y294 204 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 TDRKHQ9Y2W6 561 aaKnown RBP15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 ARL5AQ9Y689 179 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 HCFC1P51610 2035 aa15.12■□□□□ 0.01
PDLIM7-210ENST00000503827 LRRD1A4D1F6 860 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 AGAP14A8MT82 685 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZNF487B1APH4 448 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 KDM1AO60341 852 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 PROSCO94903 275 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZGLP1P0C6A0 271 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 COX6A1P12074 109 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZFXP17010 805 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 KLK2P20151 261 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 CXCR2P25025 360 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 CD68P34810 354 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZNF658BQ4V348 819 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZC3H12BQ5HYM0 836 aaKnown RBP15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ABHD17BQ5VST6 288 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 RIPOR1Q6ZS17 1223 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 PRSS58Q8IYP2 241 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 TBC1D21Q8IYX1 336 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 PHF10Q8WUB8 498 aaKnown RBP15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 GPR137Q96N19 417 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZNF304Q9HCX3 659 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 TNFRSF10DQ9UBN6 386 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 ZNF282Q9UDV7 671 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 MAU2Q9Y6X3 613 aa15.11■□□□□ 0.01
PDLIM7-210ENST00000503827 FOXO6A8MYZ6 492 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 FAM227AF5H4B4 570 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 WISP2O76076 250 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 GSTM1P09488 218 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 MCM3P25205 808 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 DNAJA1P31689 397 aaKnown RBP15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 IST1P53990 364 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 AP2B1P63010 937 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 GSTM4Q03013 218 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 TAF1AQ15573 450 aaPredicted RBP15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 NCCRP1Q6ZVX7 275 aaPredicted RBP15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 TMEM200AQ86VY9 491 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 SDCCAG3Q96C92 435 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 FOXC2Q99958 501 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 TMEM121Q9BTD3 319 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 FSD1LQ9BXM9 530 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 FAM96AQ9H5X1 160 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 RIC8BQ9NVN3 520 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 COQ3Q9NZJ6 369 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 KLHL20Q9Y2M5 609 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 DNHD1Q96M86 4753 aa15.1■□□□□ 0.01
PDLIM7-210ENST00000503827 PRRC2AP48634 2157 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 C5orf60A6NFR6 353 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 ZRANB2O95218 330 aaKnown RBP eCLIP15.09■□□□□ 0.012e-6■■■□□ 18.6
PDLIM7-210ENST00000503827 ITGALP20701 1170 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 PEBP1P30086 187 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 XIAPP98170 497 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 ALDH6A1Q02252 535 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 MPP3Q13368 585 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 ZNF766Q5HY98 468 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 SNX20Q7Z614 316 aa15.09■□□□□ 0.01
PDLIM7-210ENST00000503827 VSIG1Q86XK7 387 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms