RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ACY1Q03154 408 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 TRAP1Q12931 704 aaKnown RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 GBX1Q14549 363 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 ATP6AP1LQ52LC2 224 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 METTL2BQ6P1Q9 378 aaKnown RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 IL27RAQ6UWB1 636 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 DET1Q7L5Y6 550 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 SFRP1Q8N474 314 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 WFIKKN2Q8TEU8 576 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 OSCP1Q8WVF1 389 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 SMG7Q92540 1137 aaKnown RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 SPDL1Q96EA4 605 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 VPS50Q96JG6 964 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 HOPXQ9BPY8 73 aaPredicted RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 KLHL4Q9C0H6 718 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 PCDHAC1Q9H158 963 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 WNT5BQ9H1J7 359 aa11.31□□□□□ -0.6
USP46-204ENST00000503060 CLK4Q9HAZ1 481 aaKnown RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 MBD1Q9UIS9 605 aaPredicted RBP11.31□□□□□ -0.6
USP46-204ENST00000503060 K7EPI3 171 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 YKT6O15498 198 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ZW10O43264 779 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ATP1B2P14415 290 aaPredicted RBP11.3□□□□□ -0.6
USP46-204ENST00000503060 NFKBIAP25963 317 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 AKT1P31749 480 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 GDF5P43026 501 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ZFP36L2P47974 494 aaKnown RBP11.3□□□□□ -0.6
USP46-204ENST00000503060 UFM1P61960 85 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 BLMHQ13867 455 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 NFE2L1Q14494 772 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 Q6ZVL8 140 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 C12orf40Q86WS4 652 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 PDSS2Q86YH6 399 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 C12orf76Q8N812 135 aaPredicted RBP11.3□□□□□ -0.6
USP46-204ENST00000503060 FNDC5Q8NAU1 212 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 SCAMP4Q969E2 229 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 DCUN1D1Q96GG9 259 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 TEX37Q96LM6 180 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 A0A1W2PP18 115 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 GRXCR1A8MXD5 290 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 FXYD1O00168 92 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 NUAK1O60285 661 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 SLC22A3O75751 556 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ADH1CP00326 375 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ATF4P18848 351 aaPredicted RBP11.3□□□□□ -0.6
USP46-204ENST00000503060 XPAP23025 273 aaPredicted RBP11.3□□□□□ -0.6
USP46-204ENST00000503060 VIPR2P41587 438 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 KCNK10P57789 538 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 SGCGQ13326 291 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 GPM6BQ13491 265 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 RCAN2Q14206 197 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 LRRC36Q1X8D7 754 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 SFT2D3Q587I9 215 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ZNF805Q5CZA5 627 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 CDKL4Q5MAI5 379 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 MBOAT1Q6ZNC8 495 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ADGRD2Q7Z7M1 963 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 MINDY1Q8N5J2 469 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 LRIG1Q96JA1 1093 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 ASPSCR1Q9BZE9 553 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 RAD18Q9NS91 495 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
USP46-204ENST00000503060 PRRC2BQ5JSZ5 2229 aaKnown RBP11.3□□□□□ -0.6
USP46-204ENST00000503060 PRSS51A0A1B0GVH4 220 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 CFAP99D6REC4 459 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 LIN7AO14910 233 aaPredicted RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 PEX1O43933 1283 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 STK16O75716 305 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 C8BP07358 591 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ANXA5P08758 320 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 MPC1LP0DKB6 136 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 RPIAP49247 311 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 CREB5Q02930 508 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 EMX2Q04743 252 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 KLC1Q07866 573 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 HSPA14Q0VDF9 509 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ADGRE1Q14246 886 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ABRAXAS2Q15018 415 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 PLEKHS1Q5SXH7 462 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 OGFRL1Q5TC84 451 aaPredicted RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 LIN54Q6MZP7 749 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 UBE2R2Q712K3 238 aaPredicted RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 EPHX4Q8IUS5 362 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 TRAM1L1Q8N609 369 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 DNAJC5GQ8N7S2 189 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ZNF366Q8N895 744 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ZBTB8BQ8NAP8 495 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms