RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZBTB14O43829 449 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 PSIP1O75475 530 aaKnown RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 CATP04040 527 aaKnown RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 NTRK1P04629 796 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 SLC7A5Q01650 507 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 ABHD18Q0P651 414 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 FASTKD3Q14CZ7 662 aaKnown RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 PWWP2BQ6NUJ5 590 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 C8orf74Q6P047 294 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 CYHR1Q6ZMK1 362 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 GALNT7Q86SF2 657 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 TRIM73Q86UV7 250 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 TMEM126BQ8IUX1 230 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 CPNE9Q8IYJ1 553 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 LMNTD1Q8N9Z9 388 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 LINC01555Q8NAE3 123 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 GALNT6Q8NCL4 622 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 MNS1Q8NEH6 495 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 GIMAP7Q8NHV1 300 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 FLVCR1-AS1Q8TAF5 88 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 CD200R1Q8TD46 325 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 SNRNP27Q8WVK2 155 aaKnown RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 KIAA1143Q96AT1 154 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 LRRC1Q9BTT6 524 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 EFHD1Q9BUP0 239 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 GPN2Q9H9Y4 310 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 GRHL1Q9NZI5 618 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 RALYQ9UKM9 306 aaKnown RBP12.36□□□□□ -0.43
HSPG2-213ENST00000498495 PADI1Q9ULC6 663 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 VWA7Q9Y334 891 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 TMEM150CB9EJG8 249 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 EIF3FO00303 357 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 SCRG1O75711 98 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 TIAF1O95411 115 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 MSL3P1P0C860 447 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 LIFP15018 202 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 MCM3P25205 808 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 OAS2P29728 719 aaKnown RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 PEBP1P30086 187 aaKnown RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 SSTR1P30872 391 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 RGS4P49798 205 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 TRADDQ15628 312 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 RBM20Q5T481 1227 aaKnown RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 LRRC8EQ6NSJ5 796 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 CAPN12Q6ZSI9 719 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 CDHR3Q6ZTQ4 885 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 FAM20CQ8IXL6 584 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 GPATCH11Q8N954 259 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 C19orf47Q8N9M1 422 aaKnown RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 KIF18AQ8NI77 898 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 HMGCLL1Q8TB92 370 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 SLC7A5P2Q9GIP4 190 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 FAM60AQ9NP50 221 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 INTS7Q9NVH2 962 aaKnown RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 NSMCE4AQ9NXX6 385 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 SPATA7Q9P0W8 599 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 SLC17A6Q9P2U8 582 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-213ENST00000498495 EPG5Q9HCE0 2579 aa12.35□□□□□ -0.43
HSPG2-213ENST00000498495 KMT2BQ9UMN6 2715 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 ARHGEF33A8MVX0 844 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 E7EQ34 232 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 GFYI3L273 518 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 FKBP9O95302 570 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 SYF2O95926 243 aaKnown RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 KLK3P07288 261 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 HSD17B2P37059 387 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 CDKN2DP55273 166 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 RHDQ02161 417 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 HECTD2Q5U5R9 776 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 FAM45BPQ6NSW5 357 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 PAQR3Q6TCH7 311 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 C3orf62Q6ZUJ4 267 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 UBE2R2Q712K3 238 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-213ENST00000498495 STRA8Q7Z7C7 330 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 GPR135Q8IZ08 494 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 MMGT1Q8N4V1 131 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 OR1L3Q8NH93 324 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 FAM45AQ8TCE6 357 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 EEF1AKMT1Q8WVE0 214 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 ASB11Q8WXH4 323 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 CDKL2Q92772 493 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 ZUFSPQ96AP4 578 aa12.34□□□□□ -0.43
HSPG2-213ENST00000498495 PKP4Q99569 1192 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms