RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 GAPDHSO14556 408 aaPredicted RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 HTATSF1O43719 755 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 RTN2O75298 545 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SLC22A3O75751 556 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 WDPCPO95876 746 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 GH1P01241 217 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 ANKRD34CP0C6C1 535 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 HSPA8P11142 646 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 HLA-DOBP13765 273 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 MYL6BP14649 208 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 CSF2RAP15509 400 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 ZNF12P17014 697 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 CD27P26842 260 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 HSD17B3P37058 310 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 PDLIM4P50479 330 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 THOP1P52888 689 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 PDX1P52945 283 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SNU13P55769 128 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 NANOS3P60323 173 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 RPS18P62269 152 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 CX3CL1P78423 397 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 MBTD1Q05BQ5 628 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 NPRL3Q12980 569 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 PPA1Q15181 289 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 NONOQ15233 471 aaKnown RBP eCLIP3.46□□□□□ -1.86
CALD1-224ENST00000498254 CA9Q16790 459 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 CDO1Q16878 200 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 HFEQ30201 348 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 TWISTNBQ3B726 338 aaPredicted RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 KBTBD12Q3ZCT8 623 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 IFI44LQ53G44 452 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SPOUT1Q5T280 376 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 FAM109BQ6ICB4 259 aaPredicted RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 FAM122CQ6P4D5 195 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SYCE2Q6PIF2 218 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 CORO6Q6QEF8 472 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 PLEKHM3Q6ZWE6 761 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 PIWIL4Q7Z3Z4 852 aaKnown RBP3.46□□□□□ -1.86
CALD1-224ENST00000498254 DNAJC10Q8IXB1 793 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 AQP12AQ8IXF9 295 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 ZNF441Q8N8Z8 693 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 TRIML1Q8N9V2 468 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 LMNTD1Q8N9Z9 388 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 NPEPL1Q8NDH3 523 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 LPCAT1Q8NF37 534 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 NEK11Q8NG66 645 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 OR11H4Q8NGC9 324 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 B4GALNT2Q8NHY0 566 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 NCOA7Q8NI08 942 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 FGFBP3Q8TAT2 258 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SPATA20Q8TB22 786 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 CDCA5Q96FF9 252 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 NEURL2Q9BR09 285 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SEZ6LQ9BYH1 1024 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 SLC29A3Q9BZD2 475 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 OSBPL8Q9BZF1 889 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 VN1R1Q9GZP7 353 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 PELI2Q9HAT8 420 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 TMEM30AQ9NV96 361 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 TMEM161AQ9NX61 479 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 VPS18Q9P253 973 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 LRWD1Q9UFC0 647 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 FBXW2Q9UKT8 454 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 ACAD8Q9UKU7 415 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 TNFRSF18Q9Y5U5 241 aa3.46□□□□□ -1.86
CALD1-224ENST00000498254 ZNF521Q96K83 1311 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 IGLV5-37A0A075B6J1 123 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 A0A0G2JNG1 304 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 A0A1W2PRB8 838 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 SYCE3A1L190 88 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 DNAJC9-AS1A6NH13 148 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 SRRM3A6NNA2 597 aaPredicted RBP3.45□□□□□ -1.86
CALD1-224ENST00000498254 C4orf47A7E2U8 309 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 HNRNPCL2B2RXH8 293 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 DVL1O14640 695 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 PGRMC2O15173 223 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 ZBTB14O43829 449 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 SLC28A2O43868 658 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 RPS6KA5O75582 802 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 AKAP3O75969 853 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 OLFM2O95897 454 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 SLC16A8O95907 504 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 TOMM40O96008 361 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 GLUD1P00367 558 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 PNPP00491 289 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 ACAA1P09110 424 aaPredicted RBP3.45□□□□□ -1.86
CALD1-224ENST00000498254 HOXC6P09630 235 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 CDH1P12830 882 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 EPCAMP16422 314 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 GM2AP17900 193 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 EPHA2P29317 976 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 TIA1P31483 386 aaKnown RBP eCLIP3.45□□□□□ -1.86
CALD1-224ENST00000498254 AHRP35869 848 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 USP8P40818 1118 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 KCNJ4P48050 445 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 ARCN1P48444 511 aaKnown RBP3.45□□□□□ -1.86
CALD1-224ENST00000498254 GLUD2P49448 558 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 CLK1P49759 484 aaKnown RBP3.45□□□□□ -1.86
CALD1-224ENST00000498254 NT5C2P49902 561 aa3.45□□□□□ -1.86
CALD1-224ENST00000498254 MFAP3P55082 362 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms