RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 HLA-BQ31612 363 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 PRAMEF9Q5VWM5 478 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 KANSL1Q7Z3B3 1105 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZNF781Q8N8C0 355 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 PRSS33Q8NF86 280 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 OR52B6Q8NGF0 335 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZDHHC1Q8WTX9 485 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 C7orf26Q96N11 449 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 EPN3Q9H201 632 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 ZDHHC2Q9UIJ5 367 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 ICKQ9UPZ9 632 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 SLC22A14Q9Y267 594 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 CACNA1HO95180 2353 aa23.52■■□□□ 1.36
TNFRSF4-203ENST00000497869 WDR87Q6ZQQ6 2873 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 ARHGEF17Q96PE2 2063 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 EPN2O95208 641 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 PNLIPRP1P54315 467 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 ASPHQ12797 758 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 TRIM61Q5EBN2 209 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 KLHDC8AQ8IYD2 350 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 TCAIMQ8N3R3 496 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 TEX9Q8N6V9 391 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 DCBLD1Q8N8Z6 715 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 MAGEC3Q8TD91 643 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 THOC1Q96FV9 657 aaKnown RBP23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 PRR11Q96HE9 360 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 FAM107BQ9H098 131 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 ARRDC1-AS1Q9H2J1 176 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 SLC40A1Q9NP59 571 aa23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 TNPO3Q9Y5L0 923 aaKnown RBP23.51■■□□□ 1.35
TNFRSF4-203ENST00000497869 TMEM233B4DJY2 109 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 K7EPI3 171 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 NOBOXO60393 691 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 RPN2P04844 631 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 XRCC1P18887 633 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 MAZP56270 477 aaKnown RBP23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 YBX1P67809 324 aaKnown RBP23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 GTF2H2Q13888 395 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 CYP2A13Q16696 494 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 TCEAL6Q6IPX3 200 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 GTF2H2CQ6P1K8 395 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SLC23A3Q6PIS1 610 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SUSD1Q6UWL2 747 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 GKN2Q86XP6 184 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 AGR3Q8TD06 166 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SREK1Q8WXA9 508 aaKnown RBP23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 TCEAL3Q969E4 200 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 KIR3DX1Q9H7L2 352 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 NOL11Q9H8H0 719 aaKnown RBP23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 CPNE7Q9UBL6 633 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 MARCOQ9UEW3 520 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SH2B3Q9UQQ2 575 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 A0A1B0GTQ1 180 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 A0A1W2PPV9 198 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 WDR47O94967 919 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 HSPA4LO95757 839 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 MPLP40238 635 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 TBPL1P62380 186 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 TUBB8Q3ZCM7 444 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 TTC23LQ6PF05 361 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SYTL1Q8IYJ3 562 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 CXorf40BQ96DE9 158 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 MED8Q96G25 268 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 CDK15Q96Q40 435 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SGPP1Q9BX95 441 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 SLC32A1Q9H598 525 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 OPTCQ9UBM4 332 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 HAO1Q9UJM8 370 aa23.5■■□□□ 1.35
TNFRSF4-203ENST00000497869 TP53BP1Q12888 1972 aaPredicted RBP23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 EPHA8P29322 1005 aaPredicted RBP23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 PKLRP30613 574 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 FOXA1P55317 472 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 KRT33BQ14525 404 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 SYVN1Q86TM6 617 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 CUZD1Q86UP6 607 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 THOC6Q86W42 341 aaKnown RBP23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 C17orf82Q86X59 251 aaPredicted RBP23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 GATAD2AQ86YP4 633 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 CEP76Q8TAP6 659 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 PPP4R1Q8TF05 950 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 AGAP11Q8TF27 550 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 ATL1Q8WXF7 558 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 POLG2Q9UHN1 485 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 SLC6A14Q9UN76 642 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 HEBP2Q9Y5Z4 205 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 TMEM131Q92545 1883 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 PCDH15Q96QU1 1955 aa23.49■■□□□ 1.35
TNFRSF4-203ENST00000497869 KIR2DS5A0A0G2JLQ3 304 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 A0A0G2JNG1 304 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 PABPN1LA6NDY0 278 aaKnown RBP23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 KIR2DS3K7RE56 304 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 SERPINB5P36952 375 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 PI4KAP42356 2102 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 ERVPABLB-1P60509 514 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 LCP2Q13094 533 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 TRAF3Q13114 568 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 GPR18Q14330 331 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 KIR2DS5Q14953 304 aa23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 ZC3H14Q6PJT7 736 aaKnown RBP23.48■■□□□ 1.35
TNFRSF4-203ENST00000497869 OGFOD3Q6PK18 319 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms