RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 TMEM71Q6P5X7 295 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 EMBQ6PCB8 327 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 RBM44Q6ZP01 1051 aaKnown RBP11.53□□□□□ -0.56
APTX-233ENST00000496030 CMC1Q7Z7K0 106 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 DCUN1D3Q8IWE4 304 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 LINC01555Q8NAE3 123 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 FBXO15Q8NCQ5 510 aaPredicted RBP11.53□□□□□ -0.56
APTX-233ENST00000496030 FLVCR1-AS1Q8TAF5 88 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 SKA2Q8WVK7 121 aaPredicted RBP11.53□□□□□ -0.56
APTX-233ENST00000496030 LCN9Q8WX39 176 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 NCSTNQ92542 709 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 RAB33BQ9H082 229 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 FETUBQ9UGM5 382 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 ZNF180Q9UJW8 692 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 CLCA2Q9UQC9 943 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 ENTPD2Q9Y5L3 495 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 AHCTF1Q8WYP5 2266 aa11.53□□□□□ -0.56
APTX-233ENST00000496030 MN1Q10571 1320 aaPredicted RBP11.53□□□□□ -0.56
APTX-233ENST00000496030 PCM1Q15154 2024 aa11.52□□□□□ -0.56
APTX-233ENST00000496030 EXOC1LA0A1B0GW35 172 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 OR5K3A6NET4 321 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 MYO1CO00159 1063 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 BTN3A1O00481 513 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 ZW10O43264 779 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 DUX1O43812 170 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
APTX-233ENST00000496030 PRICKLE3O43900 615 aaPredicted RBP11.52□□□□□ -0.57
APTX-233ENST00000496030 CSO75390 466 aaKnown RBP11.52□□□□□ -0.57
APTX-233ENST00000496030 SLC35E2BP0CK96 405 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 MPSTP25325 297 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 PKLRP30613 574 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 CCNFP41002 786 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 MSH2P43246 934 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 MAGEA12P43365 314 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 RGS4P49798 205 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 GFERP55789 205 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 TMPRSS3P57727 454 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 RAB10P61026 200 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 DLG1Q12959 904 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 PHKG1Q16816 387 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 ZXDCQ2QGD7 858 aaPredicted RBP11.52□□□□□ -0.57
APTX-233ENST00000496030 ADGRD1Q6QNK2 874 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 PRICKLE2Q7Z3G6 844 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 ARHGAP22Q7Z5H3 698 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 AMIGO1Q86WK6 493 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 SPATA6LQ8N4H0 392 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 MREGQ8N565 214 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 OR4D9Q8NGE8 314 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 ISL2Q96A47 359 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 RAD51AP1Q96B01 352 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 TSPAN17Q96FV3 270 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 IL17FQ96PD4 163 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 PKP4Q99569 1192 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 SLC12A9Q9BXP2 914 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 SRMSQ9H3Y6 488 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 SYNDIG1Q9H7V2 258 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 HRASLS2Q9NWW9 162 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 SPHK1Q9NYA1 384 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.52□□□□□ -0.57
APTX-233ENST00000496030 SEMA5BQ9P283 1151 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 IL17BQ9UHF5 180 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 PDE10AQ9Y233 779 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 TDRKHQ9Y2W6 561 aaKnown RBP11.52□□□□□ -0.57
APTX-233ENST00000496030 LRRK2Q5S007 2527 aa11.52□□□□□ -0.57
APTX-233ENST00000496030 UTP20O75691 2785 aaKnown RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 PMS2P1A4D2B8 440 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 CDC7O00311 574 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 RASGRF2O14827 1237 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 SLC16A5O15375 505 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 CAPN5O15484 640 aaPredicted RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 RPN2P04844 631 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 C2P06681 752 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 TUBBP07437 444 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 INHBAP08476 426 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 THRAP10827 490 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 ERGP11308 486 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 STMN1P16949 149 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 AMD1P17707 334 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 PEBP1P30086 187 aaKnown RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 CCKBRP32239 447 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 SHMT2P34897 504 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 LSSP48449 732 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 KCNC1P48547 511 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 SERPINB9P50453 376 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 RAB28P51157 221 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 PLCL1Q15111 1095 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 CYP2A13Q16696 494 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 PPP1R3AQ16821 1122 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 LRRC8EQ6NSJ5 796 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 SBSNQ6UWP8 590 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 UBE2R2Q712K3 238 aaPredicted RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 PLXDC1Q8IUK5 500 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 LRRC56Q8IYG6 542 aaPredicted RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
APTX-233ENST00000496030 ZNF248Q8NDW4 579 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 OR9A1PQ8NGU1 263 aa11.51□□□□□ -0.57
APTX-233ENST00000496030 OR2L8Q8NGY9 312 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms