RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SYF2O95926 243 aaKnown RBP15.4■□□□□ 0.06
LIME1-209ENST00000494776 MPC1LP0DKB6 136 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 FGF5P12034 268 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 SSTR1P30872 391 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 CBLBQ13191 982 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 PDAP1Q13442 181 aaKnown RBP15.4■□□□□ 0.06
LIME1-209ENST00000494776 GRB7Q14451 532 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 CCSMST1Q4G0I0 132 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.4■□□□□ 0.06
LIME1-209ENST00000494776 LRRC8EQ6NSJ5 796 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 C3orf62Q6ZUJ4 267 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 STRA8Q7Z7C7 330 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 DTX1Q86Y01 620 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 NLGN4XQ8N0W4 816 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 CEP112Q8N8E3 955 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 LMNTD1Q8N9Z9 388 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 LINC01555Q8NAE3 123 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 NLGN4YQ8NFZ3 816 aaPredicted RBP15.4■□□□□ 0.06
LIME1-209ENST00000494776 NKD1Q969G9 470 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 CRELD1Q96HD1 420 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 CPNE5Q9HCH3 593 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 TXNDC16Q9P2K2 825 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 PILRAQ9UKJ1 303 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 VWA7Q9Y334 891 aa15.4■□□□□ 0.06
LIME1-209ENST00000494776 ARHGEF33A8MVX0 844 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 EIF3FO00303 357 aaPredicted RBP15.39■□□□□ 0.05
LIME1-209ENST00000494776 KIAA0754O94854 1291 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 SAT1P21673 171 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 MAGEA4P43358 317 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 CDKN2DP55273 166 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 TSTA3Q13630 321 aaPredicted RBP15.39■□□□□ 0.05
LIME1-209ENST00000494776 SF1Q15637 639 aaKnown RBP15.39■□□□□ 0.05
LIME1-209ENST00000494776 SLC5A12Q1EHB4 618 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 ARHGAP40Q5TG30 622 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 HECTD2Q5U5R9 776 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 FAM45BPQ6NSW5 357 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 VASH2Q86V25 355 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 SLC26A11Q86WA9 606 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 TMEM126BQ8IUX1 230 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 MYO1HQ8N1T3 1032 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 C19orf47Q8N9M1 422 aaKnown RBP15.39■□□□□ 0.05
LIME1-209ENST00000494776 OR9A1PQ8NGU1 263 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 OR8K5Q8NH50 307 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 FAM45AQ8TCE6 357 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 TCTN2Q96GX1 697 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 MENTQ9BUN1 341 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 SYTL2Q9HCH5 934 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 SPATA7Q9P0W8 599 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 RALYQ9UKM9 306 aaKnown RBP15.39■□□□□ 0.05
LIME1-209ENST00000494776 TMEM184BQ9Y519 407 aaPredicted RBP15.39■□□□□ 0.05
LIME1-209ENST00000494776 CACNA1GO43497 2377 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 ZFYVE26Q68DK2 2539 aa15.39■□□□□ 0.05
LIME1-209ENST00000494776 KRT87PA6NCN2 255 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 ZNF839A8K0R7 811 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 TMEM150CB9EJG8 249 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 GSTA2P09210 222 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 CCNYL3P0C7X3 344 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 ZNF28P17035 718 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 PEBP1P30086 187 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 VAC14Q08AM6 782 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 GLE1Q53GS7 698 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 PWWP2BQ6NUJ5 590 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 PAQR3Q6TCH7 311 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 C6orf15Q6UXA7 325 aaPredicted RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 UBE2R2Q712K3 238 aaPredicted RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 PIWIL4Q7Z3Z4 852 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 SPNS2Q8IVW8 549 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 FAM20CQ8IXL6 584 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 ESX1Q8N693 406 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 ZSCAN1Q8NBB4 408 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 NOA1Q8NC60 698 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 GALNT6Q8NCL4 622 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 EEF1AKMT1Q8WVE0 214 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 ASB11Q8WXH4 323 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 IFT81Q8WYA0 676 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 KIAA1143Q96AT1 154 aaPredicted RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 FCRL4Q96PJ5 515 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 PKP4Q99569 1192 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 INTS7Q9NVH2 962 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 MTRF1LQ9UGC7 380 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 SERTAD3Q9UJW9 196 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 PSAT1Q9Y617 370 aa15.38■□□□□ 0.05
LIME1-209ENST00000494776 DSPP15924 2871 aaKnown RBP15.38■□□□□ 0.05
LIME1-209ENST00000494776 TEX51A0A1B0GUA7 166 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 PABPN1LA6NDY0 278 aaKnown RBP15.37■□□□□ 0.05
LIME1-209ENST00000494776 MYO1CO00159 1063 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 SCRG1O75711 98 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 DLGAP3O95886 979 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 MT-ND3P03897 115 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 NTRK1P04629 796 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 CYP2A7P20853 494 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 OAS2P29728 719 aaKnown RBP15.37■□□□□ 0.05
LIME1-209ENST00000494776 HSD17B2P37059 387 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 IL2P60568 153 aa15.37■□□□□ 0.05
LIME1-209ENST00000494776 TIAL1Q01085 375 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIME1-209ENST00000494776 ILF2Q12905 390 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms