RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 GABRA4P48169 554 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 GBX1Q14549 363 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 UGT8Q16880 541 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 ZNF470Q6ECI4 717 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 PRICKLE2Q7Z3G6 844 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 LMNTD2Q8IXW0 634 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 SYTL1Q8IYJ3 562 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 DNAJC22Q8N4W6 341 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 C9orf43Q8TAL5 461 aaPredicted RBP26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 THAP4Q8WY91 577 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 IL17FQ96PD4 163 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 NLNQ9BYT8 704 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 INTS7Q9NVH2 962 aaKnown RBP26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 IL1RAPL1Q9NZN1 696 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 CIDEBQ9UHD4 219 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 NFS1Q9Y697 457 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 MAD1L1Q9Y6D9 718 aa26.13■■□□□ 1.77
SH3GL3-204ENST00000492099 CTAGE9A4FU28 777 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 E5RI56 91 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 AGXTP21549 392 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 RPS18P62269 152 aaKnown RBP26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 LONRF1Q17RB8 773 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 RNASEH2BQ5TBB1 312 aaKnown RBP26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 PCGF5Q86SE9 256 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 C2orf73Q8N5S3 287 aaPredicted RBP26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 CALML6Q8TD86 181 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 SLCO2A1Q92959 643 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 ABHD17AQ96GS6 310 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 PDLIM2Q96JY6 352 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 SIGLEC10Q96LC7 697 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 ASIC3Q9UHC3 531 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 PLCL2Q9UPR0 1127 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 MAN2B2Q9Y2E5 1009 aa26.12■■□□□ 1.77
SH3GL3-204ENST00000492099 SPTBP11277 2137 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 H3BMH7 237 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 FKBP9O95302 570 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 MATN4O95460 622 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 DEFB110Q30KQ9 67 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 LCN10Q6JVE6 187 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 TLDC1Q6P9B6 456 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 CNSTQ6PJW8 725 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 ZBTB2Q8N680 514 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 DDX47Q9H0S4 455 aaKnown RBP26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 PCYOX1Q9UHG3 505 aa26.11■■□□□ 1.77
SH3GL3-204ENST00000492099 USP27XA6NNY8 438 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 SUV39H1O43463 412 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 MAGP20916 626 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 BDKRB1P46663 353 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 GNG11P61952 73 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 PTK6Q13882 451 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 SF1Q15637 639 aaKnown RBP26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 PTCHD3Q3KNS1 767 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 ATG14Q6ZNE5 492 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 TAX1BP1Q86VP1 789 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 APLFQ8IW19 511 aaPredicted RBP26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 AGGF1Q8N302 714 aaeCLIP26.1■■□□□ 1.771e-7■□□□□ 9.2
SH3GL3-204ENST00000492099 ENDOVQ8N8Q3 282 aaKnown RBP26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 HMGCLL1Q8TB92 370 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 FAM136AQ96C01 138 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 C17orf62Q9BQA9 187 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 SPRTNQ9H040 489 aaPredicted RBP26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 CCDC68Q9H2F9 335 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 C20orf96Q9NUD7 363 aaPredicted RBP26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 SNX7Q9UNH6 387 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 SRPK3Q9UPE1 567 aa26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 RUVBL2Q9Y230 463 aaKnown RBP26.1■■□□□ 1.77
SH3GL3-204ENST00000492099 MKRN2OSH3BPM6 223 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 DNALI1O14645 258 aaPredicted RBP26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 ZSCAN9O15535 394 aaPredicted RBP26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 HCRTR1O43613 425 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 PMS2P54278 862 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 NFKB2Q00653 900 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 CTBP1Q13363 440 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 TTLL9Q3SXZ7 439 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 PAPD7Q5XG87 772 aaKnown RBP26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 RHBDD2Q6NTF9 364 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 DENND6AQ8IWF6 608 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 FAM20CQ8IXL6 584 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 LMNTD1Q8N9Z9 388 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 IRAK4Q9NWZ3 460 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 SPATA7Q9P0W8 599 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 KLHL42Q9P2K6 505 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 TCFL5Q9UL49 500 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 FAM169AQ9Y6X4 670 aa26.09■■□□□ 1.77
SH3GL3-204ENST00000492099 C9J4A7 227 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 PRICKLE3O43900 615 aaPredicted RBP26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 RFPL1O75677 317 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 CAPN1P07384 714 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 IL10RAQ13651 578 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 CCSMST1Q4G0I0 132 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 ACSBG2Q5FVE4 666 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 ZNF385CQ66K41 422 aaPredicted RBP26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 FAM198BQ6UWH4 519 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 PROKR1Q8TCW9 393 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 KCNJ9Q92806 393 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 ZUFSPQ96AP4 578 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 RUNDC3BQ96NL0 473 aa26.08■■□□□ 1.77
SH3GL3-204ENST00000492099 FAM167BQ9BTA0 163 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms