RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ARHGEF38Q9NXL2 777 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 NUDT4Q9NZJ9 180 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 OR6C2Q9NZP2 312 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 ZNF69Q9UC07 566 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 DAPK2Q9UIK4 370 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 LAS1LQ9Y4W2 734 aaKnown RBP3.14□□□□□ -1.91
HMGN1-218ENST00000490032 TRIM17Q9Y577 477 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 PCDH11YQ9BZA8 1340 aa3.14□□□□□ -1.91
HMGN1-218ENST00000490032 FEZF1A0PJY2 475 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 TMEM221A6NGB7 291 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 IDH3BO43837 385 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 ZWINTO95229 277 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 OR2T7P0C7T2 308 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 HSPA8P11142 646 aaKnown RBP3.13□□□□□ -1.91
HMGN1-218ENST00000490032 RBMS1P29558 406 aaKnown RBP3.13□□□□□ -1.91
HMGN1-218ENST00000490032 MS4A2Q01362 244 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 DDX10Q13206 875 aaKnown RBP3.13□□□□□ -1.91
HMGN1-218ENST00000490032 SQLEQ14534 574 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 PLEKHS1Q5SXH7 462 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 CCDC30Q5VVM6 783 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 TMEM207Q6UWW9 146 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 RTN4RL2Q86UN3 420 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 EID3Q8N140 333 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 OR11H4Q8NGC9 324 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 OR1L3Q8NH93 324 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 CENPTQ96BT3 561 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 DHX58Q96C10 678 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 THAP2Q9H0W7 228 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 MMP27Q9H306 513 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 PSD3Q9NYI0 1048 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 THEGQ9P2T0 379 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 TP53TG3Q9ULZ0 132 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 PPP2R2CQ9Y2T4 447 aa3.13□□□□□ -1.91
HMGN1-218ENST00000490032 AGAP14A8MT82 685 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 B4DLN1 442 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 TSPAN1O60635 241 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 MAGEC1O60732 1142 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 AVILO75366 819 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 CDK2AP2O75956 126 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 SEC24AO95486 1093 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 TRIM21P19474 475 aaKnown RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 SLC9A3P48764 834 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 MRPL12P52815 198 aaKnown RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 HERC3Q15034 1050 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 LYSMD4Q5XG99 296 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 TEX38Q6PEX7 206 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 TBC1D1Q86TI0 1168 aaPredicted RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 FBXO39Q8N4B4 442 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 AFAP1Q8N556 730 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 Q8NBF4 154 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 VANGL1Q8TAA9 524 aaPredicted RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 PTPMT1Q8WUK0 201 aaPredicted RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 GATAD1Q8WUU5 269 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 PRICKLE1Q96MT3 831 aaPredicted RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 URM1Q9BTM9 101 aaKnown RBP3.12□□□□□ -1.91
HMGN1-218ENST00000490032 OSGEPL1Q9H4B0 414 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 PANK3Q9H999 370 aa3.12□□□□□ -1.91
HMGN1-218ENST00000490032 HCFC1P51610 2035 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 C2orf81A6NN90 581 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 ENO4A6NNW6 628 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 BAIAP3O94812 1187 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 C22orf31O95567 290 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 CAPN2P17655 700 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 CDH3P22223 829 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 TMEM50BP56557 158 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 MAT1AQ00266 395 aaKnown RBP3.11□□□□□ -1.91
HMGN1-218ENST00000490032 GUCY2DQ02846 1103 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 PAX8Q06710 450 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 COX10Q12887 443 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 TAF10Q12962 218 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 ODF4Q2M2E3 257 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 DUSP28Q4G0W2 176 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 FAM180BQ6P0A1 224 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 OR13C3Q8NGS6 347 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 OR2L2Q8NH16 312 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 EXD1Q8NHP7 514 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 MAPK15Q8TD08 544 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 RASL10AQ92737 203 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 ARSGQ96EG1 525 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 PAFAH2Q99487 392 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 OLFM1Q99784 485 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 SOSTQ9BQB4 213 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 KIFC3Q9BVG8 833 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 RAB11FIP5Q9BXF6 653 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 MIS12Q9H081 205 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 SYNCQ9H7C4 482 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 PPANQ9NQ55 473 aaKnown RBP3.11□□□□□ -1.91
HMGN1-218ENST00000490032 SPHK2Q9NRA0 654 aa3.11□□□□□ -1.91
HMGN1-218ENST00000490032 A0A1W2PR80 420 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 CTDSP2O14595 271 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 AP3D1O14617 1153 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 TNFAIP3P21580 790 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 PRKACGP22612 351 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 MNDAP41218 407 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 RPL21P46778 160 aaKnown RBP3.1□□□□□ -1.91
HMGN1-218ENST00000490032 CSNK2BP67870 215 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 GCNT1Q02742 428 aa3.1□□□□□ -1.91
HMGN1-218ENST00000490032 ZNF415Q09FC8 603 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms