RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GSTM1P09488 218 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 MAGP20916 626 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 MCM3P25205 808 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 PSMB4P28070 264 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 PTGER4P35408 488 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 ATP5OP48047 213 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 TPM4P67936 248 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 GSTM4Q03013 218 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 KIR2DS3Q14952 304 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 ITPRIPL1Q6GPH6 555 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 LUZP1Q86V48 1076 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 METTL27Q8N6F8 245 aaPredicted RBP13.39□□□□□ -0.27
VARS-227ENST00000489979 OR11G2Q8NGC1 345 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 DENND1AQ8TEH3 1009 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 C19orf43Q9BQ61 176 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 MESP1Q9BRJ9 268 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
VARS-227ENST00000489979 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 SLC26A1Q9H2B4 701 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 SEMA3GQ9NS98 782 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 SUCOQ9UBS9 1254 aaKnown RBP13.39□□□□□ -0.27
VARS-227ENST00000489979 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
VARS-227ENST00000489979 PRSS21Q9Y6M0 314 aa13.39□□□□□ -0.27
VARS-227ENST00000489979 TRGV8A0A0C4DH27 118 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 DSCR3O14972 297 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 AP2A2O94973 939 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 AP2A1O95782 977 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 HTR1EP28566 365 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 OR1D4P47884 311 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 ARG2P78540 354 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 SPARCL1Q14515 664 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 PRPSAP1Q14558 356 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 DBN1Q16643 649 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 DENND5AQ6IQ26 1287 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 GFRALQ6UXV0 394 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 NAPRTQ6XQN6 538 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 MRGPRGQ86SM5 289 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 PIANPQ8IYJ0 282 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 ELMO1Q92556 727 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 NR4A3Q92570 626 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 CCDC120Q96HB5 630 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 VPS50Q96JG6 964 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 TAAR6Q96RI8 345 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 TBL1YQ9BQ87 522 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 CHST11Q9NPF2 352 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 CUTCQ9NTM9 273 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 SPTLC3Q9NUV7 552 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 PLA2G3Q9NZ20 509 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 SMARCAL1Q9NZC9 954 aa13.38□□□□□ -0.27
VARS-227ENST00000489979 NXT1Q9UKK6 140 aaKnown RBP13.38□□□□□ -0.27
VARS-227ENST00000489979 TACC2O95359 2948 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 BHMG1C9JSJ3 638 aaPredicted RBP13.37□□□□□ -0.27
VARS-227ENST00000489979 ZRANB2O95218 330 aaKnown RBP eCLIP13.37□□□□□ -0.275e-11■□□□□ 9.8
VARS-227ENST00000489979 HPP00738 406 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 COX6B1P14854 86 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 GRIA3P42263 894 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 GRM7Q14831 915 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
VARS-227ENST00000489979 ANKRD20A2Q5SQ80 823 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 ANKRD20A1Q5TYW2 823 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 ANKRD20A3Q5VUR7 823 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 YOD1Q5VVQ6 348 aaPredicted RBP13.37□□□□□ -0.27
VARS-227ENST00000489979 BNC2Q6ZN30 1099 aaPredicted RBP13.37□□□□□ -0.27
VARS-227ENST00000489979 CCDC50Q8IVM0 306 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 ZNF808Q8N4W9 903 aaPredicted RBP13.37□□□□□ -0.27
VARS-227ENST00000489979 DTWD1Q8N5C7 304 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 C2orf73Q8N5S3 287 aaPredicted RBP13.37□□□□□ -0.27
VARS-227ENST00000489979 LMNTD1Q8N9Z9 388 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 OR8K1Q8NGG5 319 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 HEMGNQ9BXL5 484 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 ZNF160Q9HCG1 818 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.272e-9■□□□□ 10.1
VARS-227ENST00000489979 MAU2Q9Y6X3 613 aa13.37□□□□□ -0.27
VARS-227ENST00000489979 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 SLC5A10A0PJK1 596 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 VSTM2BA6NLU5 285 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 H7C0S8 307 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 CCL21O00585 134 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 KDM1AO60341 852 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 FTH1P02794 183 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 PKLRP30613 574 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 MARCKSL1P49006 195 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 RAB28P51157 221 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 CACNG1Q06432 222 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 SYTL3Q4VX76 610 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 TAX1BP1Q86VP1 789 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 TMTC1Q8IUR5 882 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 KBTBD2Q8IY47 623 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 PRSS58Q8IYP2 241 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 TTC29Q8NA56 475 aaPredicted RBP13.36□□□□□ -0.27
VARS-227ENST00000489979 LINC01555Q8NAE3 123 aa13.36□□□□□ -0.27
VARS-227ENST00000489979 C8orf44Q96CB5 159 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms