RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 EPORP19235 508 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 ACTR1BP42025 376 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 HALP42357 657 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 ACTR1AP61163 376 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 ILF3Q12906 894 aaKnown RBP eCLIP21.02■□□□□ 0.968e-14■■■■■ 40.3
SMC4-221ENST00000489573 CDC16Q13042 620 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 THOC6Q86W42 341 aaKnown RBP21.02■□□□□ 0.96
SMC4-221ENST00000489573 CHCHD4Q8N4Q1 142 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 CDYL2Q8N8U2 506 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 PPFIBP2Q8ND30 876 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 CCL4L1Q8NHW4 92 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 ERP27Q96DN0 273 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 MAELQ96JY0 434 aaKnown RBP21.02■□□□□ 0.96
SMC4-221ENST00000489573 FERD3LQ96RJ6 166 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 CCDC28BQ9BUN5 200 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 TM9SF3Q9HD45 589 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 SPATA7Q9P0W8 599 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 TBC1D29Q9UFV1 150 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 ZFP69BQ9UJL9 534 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 TIMM22Q9Y584 194 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 BDP1A6H8Y1 2624 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 EPHA3P29320 983 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 PNLIPRP1P54315 467 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 PRKG2Q13237 762 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 TCEA2Q15560 299 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 RPE65Q16518 533 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 CAPN13Q6MZZ7 669 aaPredicted RBP21.02■□□□□ 0.95
SMC4-221ENST00000489573 SLC30A9Q6PML9 568 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 ABRAXAS1Q6UWZ7 409 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 RGL4Q8IZJ4 473 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 CCT6BQ92526 530 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 C19orf60Q96EN9 201 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 OR52B2Q96RD2 323 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 MYLK2Q9H1R3 596 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 MVB12BQ9H7P6 319 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 INTS7Q9NVH2 962 aaKnown RBP21.02■□□□□ 0.95
SMC4-221ENST00000489573 TRPS1Q9UHF7 1281 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 PCOLCE2Q9UKZ9 415 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 PLAGL1Q9UM63 463 aa21.02■□□□□ 0.95
SMC4-221ENST00000489573 EML5Q05BV3 1969 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 FCHO1O14526 889 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 CCDC22O60826 627 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 CAPN1P07384 714 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 MTHFD1P11586 935 aaKnown RBP21.01■□□□□ 0.95
SMC4-221ENST00000489573 HGFP14210 728 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 BLKP51451 505 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 TBPL1P62380 186 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 ARHGAP19Q14CB8 494 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 CCDC121Q6ZUS5 278 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 PHACTR4Q8IZ21 702 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 GBP7Q8N8V2 638 aaPredicted RBP21.01■□□□□ 0.95
SMC4-221ENST00000489573 METTL6Q8TCB7 284 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 GPBAR1Q8TDU6 330 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 DNASE2BQ8WZ79 361 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 GSDMCQ9BYG8 508 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 NMUR2Q9GZQ4 415 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 TCEAL2Q9H3H9 227 aaPredicted RBP21.01■□□□□ 0.95
SMC4-221ENST00000489573 ACTR8Q9H981 624 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 POLG2Q9UHN1 485 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 LNPEPQ9UIQ6 1025 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 HEBP2Q9Y5Z4 205 aa21.01■□□□□ 0.95
SMC4-221ENST00000489573 TRIOO75962 3097 aa21■□□□□ 0.95
SMC4-221ENST00000489573 OR52A4PA6NMU1 304 aa21■□□□□ 0.95
SMC4-221ENST00000489573 E7ENX8 843 aa21■□□□□ 0.95
SMC4-221ENST00000489573 PIP5K1BO14986 540 aa21■□□□□ 0.95
SMC4-221ENST00000489573 CLDN9O95484 217 aa21■□□□□ 0.95
SMC4-221ENST00000489573 SERPINA6P08185 405 aa21■□□□□ 0.95
SMC4-221ENST00000489573 ERGP11308 486 aa21■□□□□ 0.95
SMC4-221ENST00000489573 HMOX2P30519 316 aa21■□□□□ 0.95
SMC4-221ENST00000489573 HSD17B2P37059 387 aa21■□□□□ 0.95
SMC4-221ENST00000489573 TAP2Q03519 686 aa21■□□□□ 0.95
SMC4-221ENST00000489573 KRT33BQ14525 404 aa21■□□□□ 0.95
SMC4-221ENST00000489573 LSM12Q3MHD2 195 aaKnown RBP21■□□□□ 0.95
SMC4-221ENST00000489573 WDR45BQ5MNZ6 344 aa21■□□□□ 0.95
SMC4-221ENST00000489573 LAYNQ6UX15 382 aa21■□□□□ 0.95
SMC4-221ENST00000489573 LPCAT2Q7L5N7 544 aa21■□□□□ 0.95
SMC4-221ENST00000489573 LONP2Q86WA8 852 aa21■□□□□ 0.95
SMC4-221ENST00000489573 NRROSQ86YC3 692 aa21■□□□□ 0.95
SMC4-221ENST00000489573 HOMEZQ8IX15 550 aa21■□□□□ 0.95
SMC4-221ENST00000489573 LRRC56Q8IYG6 542 aaPredicted RBP21■□□□□ 0.95
SMC4-221ENST00000489573 C1orf216Q8TAB5 229 aa21■□□□□ 0.95
SMC4-221ENST00000489573 IL17FQ96PD4 163 aa21■□□□□ 0.95
SMC4-221ENST00000489573 SGPP1Q9BX95 441 aa21■□□□□ 0.95
SMC4-221ENST00000489573 SCHIP1Q9P0W5 487 aaPredicted RBP21■□□□□ 0.95
SMC4-221ENST00000489573 KLF15Q9UIH9 416 aa21■□□□□ 0.95
SMC4-221ENST00000489573 BTRCQ9Y297 605 aa21■□□□□ 0.95
SMC4-221ENST00000489573 TECTAO75443 2155 aa21■□□□□ 0.95
SMC4-221ENST00000489573 ZNF839A8K0R7 811 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 E9PBE3 544 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 TLR4O00206 839 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 KLHL41O60662 606 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 KIAA0754O94854 1291 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 GGTA1PQ4G0N0 100 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 ZNF542PQ5EBM4 170 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 METTL21CQ5VZV1 264 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 NXNQ6DKJ4 435 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 ARMCX6Q7L4S7 300 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 CLNKQ7Z7G1 428 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 C1orf210Q8IVY1 113 aa20.99■□□□□ 0.95
SMC4-221ENST00000489573 DDIASQ8IXT1 998 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms