RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ONECUT2O95948 504 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 ALBP02768 609 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 HEXAP06865 529 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 INHBBP09529 407 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 ACPPP15309 386 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 ADSLP30566 484 aaPredicted RBP8.78□□□□□ -1
SSBP1-212ENST00000489378 MAP2K3P46734 347 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 HSF1Q00613 529 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 GALNT2Q10471 571 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 MYBPHQ13203 477 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 OLIG2Q13516 323 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 SLC5A12Q1EHB4 618 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 CES4AQ5XG92 561 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 TXNRD3NBQ6F5E7 133 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 HIBCHQ6NVY1 386 aaPredicted RBP8.78□□□□□ -1
SSBP1-212ENST00000489378 DAAM2Q86T65 1068 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 LRRC49Q8IUZ0 686 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 HSCBQ8IWL3 235 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 CHERPQ8IWX8 916 aaKnown RBP8.78□□□□□ -1
SSBP1-212ENST00000489378 OR52E1Q8NGJ3 308 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 HSPH1Q92598 858 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 ALPK1Q96QP1 1244 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 FERD3LQ96RJ6 166 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 VKORC1Q9BQB6 163 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 ZCCHC2Q9C0B9 1178 aaKnown RBP8.78□□□□□ -1
SSBP1-212ENST00000489378 IL26Q9NPH9 171 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.78□□□□□ -1
SSBP1-212ENST00000489378 TAS2R14Q9NYV8 317 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 NPIPA1Q9UND3 350 aa8.78□□□□□ -1
SSBP1-212ENST00000489378 HIVEP2P31629 2446 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 A0A1B0GTH6 734 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 A0A1B0GX78 115 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 OR5H15A6NDH6 313 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 MAP2K7O14733 419 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 TOXO94900 526 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 ZRANB2O95218 330 aaKnown RBP eCLIP8.77□□□□□ -1.01
SSBP1-212ENST00000489378 SERPINA7P05543 415 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 HOXD4P09016 255 aaPredicted RBP8.77□□□□□ -1.01
SSBP1-212ENST00000489378 COX6A1P12074 109 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 ABOP16442 354 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 UGT2B7P16662 529 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 MSX1P28360 303 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 PCSK6P29122 969 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 KRTCAP3Q53RY4 240 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 LDLRAP1Q5SW96 308 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 GPRC6AQ5T6X5 926 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 ACAD10Q6JQN1 1059 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 FGD2Q7Z6J4 655 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 AMIGO1Q86WK6 493 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 PRSS58Q8IYP2 241 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 DNAJC22Q8N4W6 341 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 DTWD1Q8N5C7 304 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 METTL27Q8N6F8 245 aaPredicted RBP8.77□□□□□ -1.01
SSBP1-212ENST00000489378 PHC3Q8NDX5 983 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 DDHD1Q8NEL9 900 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 OR2L2Q8NH16 312 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 SUN3Q8TAQ9 357 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 RBM41Q96IZ5 413 aaKnown RBP8.77□□□□□ -1.01
SSBP1-212ENST00000489378 VPS50Q96JG6 964 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 OR2A14Q96R47 310 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 AGPAT1Q99943 283 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 CRB3Q9BUF7 120 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 CHRNA10Q9GZZ6 450 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 TFB2MQ9H5Q4 396 aaKnown RBP8.77□□□□□ -1.01
SSBP1-212ENST00000489378 PCDH18Q9HCL0 1135 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 PARVAQ9NVD7 372 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 COQ3Q9NZJ6 369 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 AMACRQ9UHK6 382 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 ATP6V1DQ9Y5K8 247 aa8.77□□□□□ -1.01
SSBP1-212ENST00000489378 NSG1A0A0A6YYJ2 146 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 VSTM2BA6NLU5 285 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 CTAG2O75638 210 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 BMP10O95393 424 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 LY6G6DO95868 133 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 UQCRHP07919 91 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 RARAP10276 462 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 DNASE1P24855 282 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 CCNCP24863 283 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 NSG1P42857 185 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 OR1D4P47884 311 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 KLC1Q07866 573 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 PRKG2Q13237 762 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 SYCP1Q15431 976 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TPD52L1Q16890 204 aaPredicted RBP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TFDP3Q5H9I0 405 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 ZNF766Q5HY98 468 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 ATG9BQ674R7 924 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TIGD7Q6NT04 549 aaPredicted RBP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 FAM151BQ6UXP7 276 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 NT5DC3Q86UY8 548 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 HOOK3Q86VS8 718 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 SIAH3Q8IW03 269 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 CFAP206Q8IYR0 622 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 MARVELD2Q8N4S9 558 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 TAB3Q8N5C8 712 aaPredicted RBP8.76□□□□□ -1.01
SSBP1-212ENST00000489378 CNTD1Q8N815 330 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 LILRB4Q8NHJ6 448 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 FLVCR1-AS1Q8TAF5 88 aa8.76□□□□□ -1.01
SSBP1-212ENST00000489378 FATE1Q969F0 183 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms