RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 A0A096LPK6 155 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 TLDC2A0PJX2 215 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 TMEM8BA6NDV4 472 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 NPEPPSL1A6NEC2 478 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 SMIM23A6NLE4 172 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 MYO1CO00159 1063 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 HGSO14964 777 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 TOX3O15405 576 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 C9P02748 559 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 SHBGP04278 402 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 MPOP05164 745 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 C2P06681 752 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 ENO2P09104 434 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 LTA4HP09960 611 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 JMJD7P0C870 316 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 TPBGLP0DKB5 382 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 THRAP10827 490 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 PRDX3P30048 256 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 SLC26A3P40879 764 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 EIF3IQ13347 325 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 CAMK2BQ13554 666 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 GRB7Q14451 532 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 KIR2DS3Q14952 304 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 ARHGAP19Q14CB8 494 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 SF1Q15637 639 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 FAM83EQ2M2I3 478 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 KLC3Q6P597 504 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 RAB11FIP2Q7L804 512 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 FBXO39Q8N4B4 442 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 AGBL5Q8NDL9 886 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 WDR36Q8NI36 951 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 GATA6Q92908 595 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 EGFL8Q99944 293 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 TMEM121BQ9BXQ6 578 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 UNKQ9C0B0 810 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 NMRAL1Q9HBL8 299 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 ABCF3Q9NUQ8 709 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 ARL15Q9NXU5 204 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
C9orf3-219ENST00000488186 PDP2Q9P2J9 529 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 TBK1Q9UHD2 729 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 PDE10AQ9Y233 779 aa15.23■□□□□ 0.03
C9orf3-219ENST00000488186 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 ACACAQ13085 2346 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 TLCD2A6NGC4 264 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 CDC7O00311 574 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 KIF1CO43896 1103 aaKnown RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 GUCA1CO95843 209 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 S100BP04271 92 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 SLC35E2BP0CK96 405 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 RPA3P35244 121 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 SLCO1A2P46721 670 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 KPNA2P52292 529 aaKnown RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 PNLIPRP1P54315 467 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 AP1S2P56377 157 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 PPP1CAP62136 330 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 C3orf38Q5JPI3 329 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 TMTC4Q5T4D3 741 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 THEMIS2Q5TEJ8 643 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 SPESP1Q6UW49 350 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 ADAMTSL2Q86TH1 951 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 FAM129CQ86XR2 697 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 ATL1Q8WXF7 558 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 SMPDL3AQ92484 453 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 ALKBH8Q96BT7 664 aaKnown RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 LIN37Q96GY3 246 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 CABS1Q96KC9 395 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 MAP3K3Q99759 626 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 DHRS4Q9BTZ2 278 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 NRSN2Q9GZP1 204 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 C1GALT1Q9NS00 363 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 SPHK1Q9NYA1 384 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 POMT2Q9UKY4 750 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 RNF112Q9ULX5 631 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 NOVA2Q9UNW9 492 aaKnown RBP15.22■□□□□ 0.03
C9orf3-219ENST00000488186 LOXL2Q9Y4K0 774 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 AK5Q9Y6K8 562 aa15.22■□□□□ 0.03
C9orf3-219ENST00000488186 HMX2A2RU54 273 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 KRT87PA6NCN2 255 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 SLC16A8O95907 504 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 MT-ND3P03897 115 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 ALDOAP04075 364 aaKnown RBP15.21■□□□□ 0.03
C9orf3-219ENST00000488186 ANXA5P08758 320 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 CD1DP15813 335 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 UGT2B7P16662 529 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 KRT15P19012 456 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 GCAP28676 217 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 RBMS1P29558 406 aaKnown RBP15.21■□□□□ 0.03
C9orf3-219ENST00000488186 OAS2P29728 719 aaKnown RBP15.21■□□□□ 0.03
C9orf3-219ENST00000488186 PDX1P52945 283 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 RTP5Q14D33 572 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 TSNQ15631 228 aaKnown RBP15.21■□□□□ 0.03
C9orf3-219ENST00000488186 CYP2A13Q16696 494 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 PHKG1Q16816 387 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 PRSS42Q7Z5A4 293 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 ARHGAP22Q7Z5H3 698 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 GPSM1Q86YR5 675 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 CARFQ8N187 725 aa15.21■□□□□ 0.03
C9orf3-219ENST00000488186 MREGQ8N565 214 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms