RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 ASB1Q9Y576 335 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 BIRC5O15392 142 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 GDF5P43026 501 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 HSPA7P48741 367 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 RAB28P51157 221 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 PNLIPRP1P54315 467 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 SUZ12Q15022 739 aaKnown RBP16.03■□□□□ 0.16
THBS3-207ENST00000486260 PLCL1Q15111 1095 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 LIPMQ5VYY2 423 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 PRR23CQ6ZRP0 262 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 TMEM26Q6ZUK4 368 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 SLC22A9Q8IVM8 553 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 SYTL1Q8IYJ3 562 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 TCAIMQ8N3R3 496 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 AVL9Q8NBF6 648 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 OR4E2Q8NGC2 313 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 LCN9Q8WX39 176 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 ATL1Q8WXF7 558 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 PYCR2Q96C36 320 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 CCDC126Q96EE4 140 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 TMEM237Q96Q45 408 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 SPATA7Q9P0W8 599 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 BTBD3Q9Y2F9 522 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 PCDHGB2Q9Y5G2 931 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 RNF215Q9Y6U7 377 aa16.03■□□□□ 0.16
THBS3-207ENST00000486260 STX16-NPEPL1H3BU86 382 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 STX16O14662 325 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 KDM1AO60341 852 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 TRIM13O60858 407 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 ERGP11308 486 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 FGF3P11487 239 aaPredicted RBP16.02■□□□□ 0.15
THBS3-207ENST00000486260 EEF1DP29692 281 aaKnown RBP16.02■□□□□ 0.15
THBS3-207ENST00000486260 PKLRP30613 574 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 GGT5P36269 586 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 NAGLUP54802 743 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 GYS2P54840 703 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 NAE1Q13564 534 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 CYP2A13Q16696 494 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 PTCHD3Q3KNS1 767 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.15
THBS3-207ENST00000486260 DBX2Q6ZNG2 339 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 ZCCHC23Q6ZST2 131 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 RAB44Q7Z6P3 723 aaPredicted RBP16.02■□□□□ 0.15
THBS3-207ENST00000486260 RBM12BQ8IXT5 1001 aaKnown RBP16.02■□□□□ 0.15
THBS3-207ENST00000486260 RAB42Q8N4Z0 105 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 LINC01555Q8NAE3 123 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 DYDC1Q8WWB3 177 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 MED8Q96G25 268 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 TBC1D10AQ9BXI6 508 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 CD244Q9BZW8 370 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 LRIT1Q9P2V4 623 aa16.02■□□□□ 0.15
THBS3-207ENST00000486260 E7ENX8 843 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 POLR3GO15318 223 aaPredicted RBP16.01■□□□□ 0.15
THBS3-207ENST00000486260 NEFHP12036 1026 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 IMPDH1P20839 514 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 BGNP21810 368 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 HSD17B2P37059 387 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 DNAJB13P59910 316 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 HERVK_113P63132 956 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 NHLH1Q02575 133 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 TAP2Q03519 686 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 TSTA3Q13630 321 aaPredicted RBP16.01■□□□□ 0.15
THBS3-207ENST00000486260 ARHGAP19Q14CB8 494 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 CHI3L2Q15782 390 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 ZNF678Q5SXM1 525 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 ANKS6Q68DC2 871 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 SUSD1Q6UWL2 747 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 RPS27LQ71UM5 84 aaKnown RBP16.01■□□□□ 0.15
THBS3-207ENST00000486260 AMIGO1Q86WK6 493 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
THBS3-207ENST00000486260 CCNYL1Q8N7R7 359 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 FAM181AQ8N9Y4 354 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 OR56A3Q8NH54 315 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 GATA5Q9BWX5 397 aaPredicted RBP16.01■□□□□ 0.15
THBS3-207ENST00000486260 RAB11FIP5Q9BXF6 653 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 ERVK-6Q9BXR3 956 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 SRMSQ9H3Y6 488 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 ABCF3Q9NUQ8 709 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 PADI4Q9UM07 663 aa16.01■□□□□ 0.15
THBS3-207ENST00000486260 LY6G6EA0A0G2JKS1 128 aa16■□□□□ 0.15
THBS3-207ENST00000486260 RHPN2P1A8MT19 583 aa16■□□□□ 0.15
THBS3-207ENST00000486260 NUDT21O43809 227 aaKnown RBP16■□□□□ 0.15
THBS3-207ENST00000486260 CCNT2O60583 730 aaKnown RBP16■□□□□ 0.15
THBS3-207ENST00000486260 STK16O75716 305 aa16■□□□□ 0.15
THBS3-207ENST00000486260 GLB1P16278 677 aa16■□□□□ 0.15
THBS3-207ENST00000486260 SHMT2P34897 504 aa16■□□□□ 0.15
THBS3-207ENST00000486260 GRK6P43250 576 aa16■□□□□ 0.15
THBS3-207ENST00000486260 SLC6A12P48065 614 aa16■□□□□ 0.15
THBS3-207ENST00000486260 PCBP2Q15366 365 aaKnown RBP eCLIP16■□□□□ 0.15
THBS3-207ENST00000486260 NR0B2Q15466 257 aa16■□□□□ 0.15
THBS3-207ENST00000486260 UNC50Q53HI1 259 aa16■□□□□ 0.15
THBS3-207ENST00000486260 OR2L8Q8NGY9 312 aa16■□□□□ 0.15
THBS3-207ENST00000486260 SETD7Q8WTS6 366 aaKnown RBP16■□□□□ 0.15
THBS3-207ENST00000486260 UBTD2Q8WUN7 234 aa16■□□□□ 0.15
THBS3-207ENST00000486260 SH3KBP1Q96B97 665 aa16■□□□□ 0.15
THBS3-207ENST00000486260 L3HYPDHQ96EM0 354 aa16■□□□□ 0.15
THBS3-207ENST00000486260 SLC38A3Q99624 504 aa16■□□□□ 0.15
THBS3-207ENST00000486260 INTS7Q9NVH2 962 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms