RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 KLHL38Q2WGJ6 581 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 KBTBD12Q3ZCT8 623 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 CCSMST1Q4G0I0 132 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 DNTTIP2Q5QJE6 756 aaKnown RBP12.51□□□□□ -0.41
SSR4-211ENST00000486204 HECTD2Q5U5R9 776 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 NEK10Q6ZWH5 1172 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 STRA8Q7Z7C7 330 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 OOSP2Q86WS3 158 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 PLXDC1Q8IUK5 500 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 DCUN1D3Q8IWE4 304 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 CPNE9Q8IYJ1 553 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 ADGRF3Q8IZF5 1079 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 FBXO39Q8N4B4 442 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 LCN9Q8WX39 176 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 TGM7Q96PF1 710 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 FUT8Q9BYC5 575 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 RHOJQ9H4E5 214 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 XKR8Q9H6D3 395 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 SEMA5BQ9P283 1151 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 TSR3Q9UJK0 312 aaKnown RBP12.51□□□□□ -0.41
SSR4-211ENST00000486204 ACSL6Q9UKU0 697 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
SSR4-211ENST00000486204 OR6C74A6NCV1 312 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 EIF3FO00303 357 aaPredicted RBP12.5□□□□□ -0.41
SSR4-211ENST00000486204 PSIP1O75475 530 aaKnown RBP12.5□□□□□ -0.41
SSR4-211ENST00000486204 C1orf105O95561 183 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 TSPAN12O95859 305 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 MPC1LP0DKB6 136 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 HGFP14210 728 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 MCM3P25205 808 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 PKLRP30613 574 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 STX2P32856 288 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 SHMT2P34897 504 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 DEKP35659 375 aaKnown RBP12.5□□□□□ -0.41
SSR4-211ENST00000486204 ETV5P41161 510 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 BDKRB1P46663 353 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 EIF3IQ13347 325 aaKnown RBP12.5□□□□□ -0.41
SSR4-211ENST00000486204 EFTUD2Q15029 972 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■■■■■ 41.9
SSR4-211ENST00000486204 KYNUQ16719 465 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 TTLL9Q3SXZ7 439 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.5□□□□□ -0.41
SSR4-211ENST00000486204 TEX35Q5T0J7 233 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 FAM45BPQ6NSW5 357 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 CYHR1Q6ZMK1 362 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 RAB11FIP2Q7L804 512 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 PRSS42Q7Z5A4 293 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 VASH2Q86V25 355 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 IFT20Q8IY31 132 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 BMPERQ8N8U9 685 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 GPATCH11Q8N954 259 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 OR4E2Q8NGC2 313 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 FLVCR1-AS1Q8TAF5 88 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 FAM45AQ8TCE6 357 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 FBF1Q8TES7 1133 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 VPS39Q96JC1 886 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 RBBP8Q99708 897 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 STRADBQ9C0K7 418 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 HRASLS2Q9NWW9 162 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 SIDT1Q9NXL6 827 aaKnown RBP12.5□□□□□ -0.41
SSR4-211ENST00000486204 NSMCE4AQ9NXX6 385 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 KLHL3Q9UH77 587 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 POLG2Q9UHN1 485 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 ANAPC2Q9UJX6 822 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 POMT2Q9UKY4 750 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 PLAGL1Q9UM63 463 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 LOXL2Q9Y4K0 774 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 CREBBPQ92793 2442 aa12.5□□□□□ -0.41
SSR4-211ENST00000486204 LRRK2Q5S007 2527 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 FAM95CA0A1B0GW59 222 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 A8MU76 341 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 ARHGEF33A8MVX0 844 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 TOX3O15405 576 aaPredicted RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 CBSLP0DN79 551 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 MYBL2P10244 700 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 CCL4P13236 92 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 POLR2CP19387 275 aaPredicted RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 WT1P19544 449 aaPredicted RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 ITIH1P19827 911 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 CBSP35520 551 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 GP5P40197 560 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 PPM1FP49593 454 aaPredicted RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 KPNA2P52292 529 aaKnown RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 TAS2R39P59534 338 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 SNAP47Q5SQN1 464 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 IRGCQ6NXR0 463 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 PAQR3Q6TCH7 311 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 TMEM207Q6UWW9 146 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 FAM92BQ6ZTR7 304 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 CEP128Q6ZU80 1094 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 PIWIL4Q7Z3Z4 852 aaKnown RBP12.49□□□□□ -0.41
SSR4-211ENST00000486204 AMIGO1Q86WK6 493 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 LINC01555Q8NAE3 123 aa12.49□□□□□ -0.41
SSR4-211ENST00000486204 DENND1AQ8TEH3 1009 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms