RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 OSGEPL1Q9H4B0 414 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ACTR5Q9H9F9 607 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A7Q9HAW7 530 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A10Q9HAW8 530 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A8Q9HAW9 530 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 SARS2Q9NP81 518 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF71Q9NQZ8 489 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 FGFR1OP2Q9NVK5 253 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 PIH1D1Q9NWS0 290 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 PKD2L2Q9NZM6 624 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 AKAP7Q9P0M2 348 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 KLHL14Q9P2G3 628 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 CPNE7Q9UBL6 633 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 CORO1CQ9ULV4 474 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF711Q9Y462 761 aa9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 ZNF106Q9H2Y7 1883 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-208ENST00000486159 CCT8L1PA6NM43 557 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 OR52A4PA6NMU1 304 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 B4E171 279 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 BUD23O43709 281 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 H2AFYO75367 372 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 PIAS1O75925 651 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC25A14O95258 325 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 VAPBO95292 243 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 CRTAMO95727 393 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 ALDOAP04075 364 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 NEFHP12036 1026 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 F3P13726 295 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 GRK2P25098 689 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 RPL10P27635 214 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 CD82P27701 267 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 CRABP2P29373 138 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 TSPAN7P41732 249 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 CHRNA4P43681 627 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 POLE2P56282 527 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 RPL26P61254 145 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 UBE2IP63279 158 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 GPLD1P80108 840 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 ACVR1Q04771 509 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 MSLNQ13421 630 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 OLIG2Q13516 323 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 BMPR2Q13873 1038 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 IGFBP7Q16270 282 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SIRPB2Q5JXA9 342 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SPDYAQ5MJ70 313 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 NEPROQ6NW34 567 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 CERS6Q6ZMG9 384 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 ZC3HC1Q86WB0 502 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 ZSCAN1Q8NBB4 408 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 C2CD4AQ8NCU7 369 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 GPR150Q8NGU9 434 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 RDH11Q8TC12 318 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 STYXQ8WUJ0 223 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 RSC1A1Q92681 617 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 VPS39Q96JC1 886 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 TSNARE1Q96NA8 513 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 TGM7Q96PF1 710 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SIKE1Q9BRV8 207 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 TRIM56Q9BRZ2 755 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 B3GNT4Q9C0J1 378 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC25A18Q9H1K4 315 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 AKIRIN1Q9H9L7 192 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 ZFYVE1Q9HBF4 777 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 MLXIPLQ9NP71 852 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 IARS2Q9NSE4 1012 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 PCMTD2Q9NV79 361 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 GEMIN8Q9NWZ8 242 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SIDT1Q9NXL6 827 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 HACD3Q9P035 362 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 SLC17A7Q9P2U7 560 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 RPL26L1Q9UNX3 145 aaKnown RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 HEMK1Q9Y5R4 338 aaPredicted RBP9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 PSAT1Q9Y617 370 aa9.16□□□□□ -0.94
TMEM39A-208ENST00000486159 PRR19A6NJB7 356 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 DCTN3O75935 186 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 STK17BO94768 372 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 SNUPNO95149 360 aaKnown RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 DLGAP3O95886 979 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 BPGMP07738 259 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A6P19224 532 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A1P22309 533 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 UGT1A4P22310 534 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 CD151P48509 253 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 POU4F1Q01851 419 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TLE1Q04724 770 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 IFT88Q13099 833 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 LRP8Q14114 963 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 SEPT6Q14141 434 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 CLPPQ16740 277 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 TSNAXIP1Q2TAA8 658 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 DEFB109BQ30KR1 87 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 ATP13A5Q4VNC0 1218 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 LACTB2Q53H82 288 aaPredicted RBP9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 C16orf46Q6P387 395 aa9.15□□□□□ -0.94
TMEM39A-208ENST00000486159 BORAQ6PGQ7 559 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms