RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ASZ1Q8WWH4 475 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TFGQ92734 400 aaPredicted RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 ALKBH8Q96BT7 664 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 LRRC39Q96DD0 335 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DCUN1D1Q96GG9 259 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TAAR9Q96RI9 348 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 CD180Q99467 661 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 CMKLR1Q99788 373 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 EBNA1BP2Q99848 306 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 NAT9Q9BTE0 207 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 STRADBQ9C0K7 418 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 PRORYQ9H606 182 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 VPS37BQ9H9H4 285 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 AKIRIN1Q9H9L7 192 aaPredicted RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 THSD1Q9NS62 852 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 CATSPERZQ9NTU4 200 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 INTS10Q9NVR2 710 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 MOCS1Q9NZB8 636 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 FAM8A1Q9UBU6 413 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 PILRAQ9UKJ1 303 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ICKQ9UPZ9 632 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 BTRCQ9Y297 605 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 LOXL2Q9Y4K0 774 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 HEBP2Q9Y5Z4 205 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 PSAT1Q9Y617 370 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 NFS1Q9Y697 457 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 SHANK1Q9Y566 2161 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 GCN1Q92616 2671 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 NBASA2RRP1 2371 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ELOA3CA0A087WX78 387 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 IGHV5-51A0A0C4DH38 117 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 A0A1W2PPV9 198 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 CTAGE15A4D2H0 777 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TLCD2A6NGC4 264 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ELOA3DA6NLF2 546 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 PDZK1P1A8MUH7 402 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 GFYI3L273 518 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 EIF3FO00303 357 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 MATN2O00339 956 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 BTN3A3O00478 584 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 RAD51CO43502 376 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 NIPSNAP2O75323 286 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 C1QL1O75973 258 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TNFSF15O95150 251 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 WISP3O95389 354 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 TTC4O95801 387 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TSPAN12O95859 305 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 FTH1P02794 183 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TUBB4AP04350 444 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 OR56A5P0C7T3 313 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ITGB6P18564 788 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ITGAXP20702 1163 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 F8A1P23610 371 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 HALP42357 657 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 SLC1A2P43004 574 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 BDKRB1P46663 353 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 LMAN1P49257 510 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 KPNA2P52292 529 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 EFNA3P52797 238 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 PRAMEP78395 509 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 DR1Q01658 176 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ABRQ12979 859 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 MAP7Q14244 749 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 IL11RAQ14626 422 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 KCNAB1Q14722 419 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 KYNUQ16719 465 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ELOA3BQ3SY89 546 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 AMZ1Q400G9 498 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 DNAJC21Q5F1R6 531 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 PLEKHS1Q5SXH7 462 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 RBM20Q5T481 1227 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 RNF187Q5TA31 235 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 LCN10Q6JVE6 187 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 MRNIPQ6NTE8 343 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 UNC5DQ6UXZ4 953 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 SYT10Q6XYQ8 523 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 DNAJC14Q6Y2X3 702 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 CYHR1Q6ZMK1 362 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 C1orf229Q6ZS94 237 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 KIAA0408Q6ZU52 694 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 NEK10Q6ZWH5 1172 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TAS2R42Q7RTR8 314 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 CTAGE6Q86UF2 777 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TRIM73Q86UV7 250 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 SPACA3Q8IXA5 215 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 NOA1Q8NC60 698 aaKnown RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 GALNT6Q8NCL4 622 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 C2CD4AQ8NCU7 369 aaPredicted RBP5.54□□□□□ -1.52
CUX1-208ENST00000485792 ELOA3Q8NG57 546 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 OR5AR1Q8NGP9 310 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 OR6P1Q8NGX9 317 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 NCSTNQ92542 709 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 DLG3Q92796 817 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 FAM136AQ96C01 138 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 ZDHHC12Q96GR4 267 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 C12orf66Q96MD2 445 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 IL17FQ96PD4 163 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 FCRL4Q96PJ5 515 aa5.54□□□□□ -1.52
CUX1-208ENST00000485792 TEFMQ96QE5 360 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms