RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 RAB36O95755 333 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GHRHRQ02643 423 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GPAT4Q86UL3 456 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 DHRS1Q96LJ7 313 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 GFM1Q96RP9 751 aaKnown RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ASPNQ9BXN1 380 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 IL25Q9H293 177 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 A0A1W2PQ45 241 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-212ENST00000480614 A0A1W2PQY0 241 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 DAPL1A0PJW8 107 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 FABP12A6NFH5 140 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 EFCAB9A8MZ26 197 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 CILPO75339 1184 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ADGRE1Q14246 886 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ALG1LQ6GMV1 187 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 NUS1Q96E22 293 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 LRRC3Q9BY71 257 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 TBC1D17Q9HA65 648 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ARL8BQ9NVJ2 186 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 ZIM2Q9NZV7 527 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SLC17A7Q9P2U7 560 aa9.37□□□□□ -0.91
VEGFA-212ENST00000480614 SRCP12931 536 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CPN2P22792 545 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 LRRC70Q7Z2Q7 622 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 NPAS4Q8IUM7 802 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 OR52J3Q8NH60 311 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 OTUB2Q96DC9 234 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 MATN3O15232 486 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 MSI1O43347 362 aaKnown RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 BANF1O75531 89 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 PRPS1L1P21108 318 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CLCN4P51793 760 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 LIMK2P53671 638 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 FAM110CQ1W6H9 321 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 GPR33Q49SQ1 333 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF613Q6PF04 617 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TMEM109Q9BVC6 243 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF471Q9BX82 626 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF717Q9BY31 904 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 NIFKQ9BYG3 293 aaKnown RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ST6GALNAC4Q9H4F1 302 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TBCCD1Q9NVR7 557 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 C5orf51A6NDU8 294 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 H6PDO95479 791 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SLC5A3P53794 718 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 MAZP56270 477 aaKnown RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 IDNKQ5T6J7 187 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CFAP52Q8N1V2 620 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 PACRGLQ8N7B6 248 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 PLK2Q9NYY3 685 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 WASF3Q9UPY6 502 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 U3KQV3 271 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TP53BP1Q12888 1972 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 COL5A2P05997 1499 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ERP29P30040 261 aaKnown RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SELENOVP59797 346 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 HERVK_113P63132 956 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ERVK-8P63133 956 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ILDR1Q86SU0 546 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 DGAT2Q96PD7 388 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ERVK-6Q9BXR3 956 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ABCD2Q9UBJ2 740 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 RAP2AP10114 183 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 AGXTP21549 392 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 F8A1P23610 371 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 DNAJA1P31689 397 aaKnown RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 PTGS2P35354 604 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CDKN2BP42772 138 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 MAGEA12P43365 314 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 XKP51811 444 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 LIN52Q52LA3 116 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 ZDHHC21Q8IVQ6 265 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SLC29A3Q9BZD2 475 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 POFUT2Q9Y2G5 429 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SCDO00767 359 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SP100P23497 879 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 RHBDL3P58872 404 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CYP4F8P98187 520 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 KIAA0930Q6ICG6 404 aaPredicted RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SLC29A4Q7RTT9 530 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CEP76Q8TAP6 659 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 KLHL6Q8WZ60 621 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 COPS4Q9BT78 406 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 FBXW2Q9UKT8 454 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 GAD2Q05329 585 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 CHIT1Q13231 466 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SP140Q13342 867 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 TNFRSF10BO14763 440 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 MFSD11O43934 449 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 SEPHS1P49903 392 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 UBAP2Q5T6F2 1119 aaKnown RBP9.36□□□□□ -0.91
VEGFA-212ENST00000480614 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 NRSN1Q8IZ57 195 aa9.36□□□□□ -0.91
VEGFA-212ENST00000480614 FUBP3Q96I24 572 aaKnown RBP eCLIP9.36□□□□□ -0.912e-6■□□□□ 10.7
VEGFA-212ENST00000480614 GPR88Q9GZN0 384 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms