RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ELMO1Q92556 727 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 EXTL1Q92935 676 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 NKD1Q969G9 470 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 PMEPA1Q969W9 287 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 RMDN2Q96LZ7 410 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 NUDT22Q9BRQ3 303 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 DERL2Q9GZP9 239 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 FAM96AQ9H5X1 160 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 VIPAS39Q9H9C1 493 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 RDH14Q9HBH5 336 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 SLC40A1Q9NP59 571 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 GEMIN8Q9NWZ8 242 aaKnown RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 SENP1Q9P0U3 644 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 SPATA7Q9P0W8 599 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 IL17BQ9UHF5 180 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 TRMT6Q9UJA5 497 aaKnown RBP8.66□□□□□ -1.02
DDX56-211ENST00000479602 PLEKHM1Q9Y4G2 1056 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 KLK4Q9Y5K2 254 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 DOPEY2Q9Y3R5 2298 aa8.66□□□□□ -1.02
DDX56-211ENST00000479602 SDK2Q58EX2 2172 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 TEX15Q9BXT5 2789 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 MN1Q10571 1320 aaPredicted RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 IGHV1OR21-1A0A087WYE8 117 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 B4E171 279 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 GOLGA8KD6RF30 607 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 GOLGA8TH3BQL2 631 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 MYO1CO00159 1063 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 NIPSNAP2O75323 286 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ALDOAP04075 364 aaKnown RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 MSL3P1P0C860 447 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 JMJD7P0C870 316 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 THRAP10827 490 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 STMN1P16949 149 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 AK4P27144 223 aaPredicted RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 TSPAN7P41732 249 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 SERPINB8P50452 374 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 RAB10P61026 200 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ATP6V0D1P61421 351 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 KCNC4Q03721 635 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 CLCA4Q14CN2 919 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 RPE65Q16518 533 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 PPP1R3AQ16821 1122 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 TTC23LQ6PF05 361 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 KLHL35Q6PF15 583 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 CRTC3Q6UUV7 619 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 CYHR1Q6ZMK1 362 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 FAM83HQ6ZRV2 1179 aaPredicted RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 TMEM26Q6ZUK4 368 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 USP53Q70EK8 1073 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ADAMTSL2Q86TH1 951 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 LDB1Q86U70 411 aaPredicted RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 KLHDC8AQ8IYD2 350 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ACVR1CQ8NER5 493 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 PATE1Q8WXA2 126 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ASB11Q8WXH4 323 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 TAAR9Q96RI9 348 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 CD180Q99467 661 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 GPR21Q99679 349 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 MENTQ9BUN1 341 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 CLMPQ9H6B4 373 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 IL1RAPL1Q9NZN1 696 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 OR6C2Q9NZP2 312 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ZNF624Q9P2J8 865 aaPredicted RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 CPNE7Q9UBL6 633 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 KCNK6Q9Y257 313 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 CRYL1Q9Y2S2 319 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 ACTL7BQ9Y614 415 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 NFS1Q9Y697 457 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 COLEC10Q9Y6Z7 277 aa8.65□□□□□ -1.02
DDX56-211ENST00000479602 SPTBN1Q01082 2364 aaKnown RBP8.65□□□□□ -1.02
DDX56-211ENST00000479602 PRRC2CQ9Y520 2896 aaKnown RBP8.65□□□□□ -1.03
DDX56-211ENST00000479602 A0A087X1B8 175 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 IQANK1A0A1B0GTG1 560 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 B4DGG1 531 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 EML2O95834 649 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 GSTA1P08263 222 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 SNRPAP09012 282 aaKnown RBP8.64□□□□□ -1.03
DDX56-211ENST00000479602 ANKRD34CP0C6C1 535 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 SLC35E2BP0CK96 405 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 SFTPCP11686 197 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 CHRM3P20309 590 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 FMO4P31512 558 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 CSF2RBP32927 897 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 SLC19A1P41440 591 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 MSH2P43246 934 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 CAPZBP47756 277 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 CDKN2DP55273 166 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 TAS2R39P59534 338 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 IL2P60568 153 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 HHEXQ03014 270 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 RELAQ04206 551 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
DDX56-211ENST00000479602 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 NAA25Q14CX7 972 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 TSNAXIP1Q2TAA8 658 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 SYTL3Q4VX76 610 aa8.64□□□□□ -1.03
DDX56-211ENST00000479602 HP1BP3Q5SSJ5 553 aaPredicted RBP8.64□□□□□ -1.03
DDX56-211ENST00000479602 RBM20Q5T481 1227 aaKnown RBP8.64□□□□□ -1.03
DDX56-211ENST00000479602 ZNF648Q5T619 568 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms