RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CAP1Q01518 475 aa24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 BNIP3Q12983 259 aa24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 BEND7Q8N7W2 519 aaPredicted RBP24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 ARL10Q8N8L6 244 aa24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 CCDC138Q96M89 665 aa24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 HECAQ9UBI9 543 aaPredicted RBP24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 B3GNT3Q9Y2A9 372 aa24.03■■□□□ 1.44
SYNGAP1-206ENST00000479510 CLPXO76031 633 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 SERPINA1P01009 418 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 C8GP07360 202 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 ZNF182P17025 639 aaPredicted RBP24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 SERPINA4P29622 427 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 HNMTP50135 292 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 SHQ1Q6PI26 577 aaKnown RBP24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 DNAJC14Q6Y2X3 702 aaPredicted RBP24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 ZC3H7AQ8IWR0 971 aaKnown RBP24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 PGBD3Q8N328 593 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 VN1R3Q9BXE9 311 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 SRRDQ9UH36 339 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 SAMD4AQ9UPU9 718 aaKnown RBP24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 PCDHGB1Q9Y5G3 927 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 HSPE1-MOB4S4R3N1 261 aa24.02■■□□□ 1.44
SYNGAP1-206ENST00000479510 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 M0QX08 132 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 PITPNM1O00562 1244 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 HS6ST1O60243 411 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 NOBOXO60393 691 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 PDYNP01213 254 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 HTR1AP08908 422 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 EPORP19235 508 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 PTPN6P29350 595 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 RPIAP49247 311 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 MEP1AQ16819 746 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 CTU2Q2VPK5 515 aaKnown RBP24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 XKR5Q6UX68 686 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 LINC00299Q6ZSB3 139 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 DCP2Q8IU60 420 aaKnown RBP24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 PAF1Q8N7H5 531 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 SETD9Q8NE22 299 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 WFDC5Q8TCV5 224 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 NETO1Q8TDF5 533 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ADAMTS19Q8TE59 1207 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 GIPC3Q8TF64 312 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 IGSF21Q96ID5 467 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ZIC5Q96T25 663 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 SLC12A9Q9BXP2 914 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 TRIT1Q9H3H1 467 aaKnown RBP24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 RAD21L1Q9H4I0 556 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ARL15Q9NXU5 204 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 KCNE1BA0A087WTH5 132 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 SMAD6O43541 496 aaKnown RBP24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 CCNDBP1O95273 360 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 OLFM2O95897 454 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 BMXP51813 675 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 PHC1P78364 1004 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 VAC14Q08AM6 782 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ABRQ12979 859 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 GTDC1Q4AE62 458 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 MPP7Q5T2T1 576 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ZDHHC20Q5W0Z9 365 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 L3MBTL4Q8NA19 623 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 BPIFB6Q8NFQ5 453 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 SELENOMQ8WWX9 145 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 COX4I2Q96KJ9 171 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ELOVL6Q9H5J4 265 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 ERVW-1Q9UQF0 538 aa24.01■■□□□ 1.43
SYNGAP1-206ENST00000479510 SLC1A7O00341 560 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 TRPC1P48995 793 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 SP3Q02447 781 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 ZNF33BQ06732 778 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 LAPTM5Q13571 262 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 DPY19L1Q2PZI1 675 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 DUS1LQ6P1R4 473 aaKnown RBP24■■□□□ 1.43
SYNGAP1-206ENST00000479510 DNAJB7Q7Z6W7 309 aaPredicted RBP24■■□□□ 1.43
SYNGAP1-206ENST00000479510 TMEM150AQ86TG1 271 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 RBM23Q86U06 439 aaKnown RBP24■■□□□ 1.43
SYNGAP1-206ENST00000479510 SERPINA11Q86U17 422 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 PHACTR4Q8IZ21 702 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 APCDD1Q8J025 514 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 OR6K2Q8NGY2 324 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 FKBP10Q96AY3 582 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 FAM210AQ96ND0 272 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 NODALQ96S42 347 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 IRAK4Q9NWZ3 460 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 LMCD1Q9NZU5 365 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 TMEFF2Q9UIK5 374 aaPredicted RBP24■■□□□ 1.43
SYNGAP1-206ENST00000479510 DLGAP4Q9Y2H0 992 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 PPIL1Q9Y3C6 166 aa24■■□□□ 1.43
SYNGAP1-206ENST00000479510 IGLV3-16A0A075B6K0 115 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 SLC16A5O15375 505 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 UGT2B11O75310 529 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 HOXD10P28358 340 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 SP140Q13342 867 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 GBX1Q14549 363 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 CPSF6Q16630 551 aaKnown RBP eCLIP23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 LHX8Q68G74 356 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 TPRG1Q6ZUI0 275 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 HS3ST5Q8IZT8 346 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 COPS8Q99627 209 aa23.99■■□□□ 1.43
SYNGAP1-206ENST00000479510 SLC6A13Q9NSD5 602 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms